Gene Information

Name : kdsB (PA2979)
Accession : NP_251669.1
Strain : Pseudomonas aeruginosa PAO1
Genome accession: NC_002516
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : 2.7.7.38
Position : 3337692 - 3338456 bp
Length : 765 bp
Strand : -
Note : Product name confidence: class 2 (High similarity to functionally studied protein)

DNA sequence :
ATGACCCAGGCGTTCACTGTCGTCATTCCCGCCCGCTACGCCTCCACTCGCCTGCCCGGCAAGCCATTGCAGGATATCGC
CGGCCAGCCAATGATCCAGCGCGTCTGGAACCAGGCCCGCAAGAGCGCCGCCAGCCGCGTGGTCGTCGCCACCGACGACG
AACGCATCCTGGCGGCGTGCCAGGGGTTCGGCGCCGAGGCGCTGCTGACGCGTGCCGAGCACAACTCCGGCACCGATCGC
CTGGAGGAAGTCGCTTCCCGGCTCGGCCTGGCCAGCGATGCCATCGTGGTCAACGTCCAGGGCGACGAACCGCTGATCCC
CCCGGCGCTCATCGACCAGGTGGCGGCCAACCTGGCGGCGCACCCGGAAGCTGCCATCGCTACCCTGGCCGAGCCGATCC
ATGAGGTCTCCGCGCTGTTCAATCCGAACGTGGTCAAGGTCGCCACCGACATCGACGGCCTGGCCCTGACTTTCAGTCGT
GCGCCCTTGCCCTGGGCTCGCGACGCCTTCGCCCGCGATCGCGACAGCCTGCCGGAGGGCGTGCCCTATCGTCGCCACAT
CGGCATCTACGCCTATCGCGTGGGTTTCCTTGCCGATTTCGTCGCCTGGGGACCGTGCTGGCTGGAGAACGCCGAAAGCC
TTGAGCAATTGCGCGCGCTCTGGCACGGGGTGCGAATCCATGTGGCCGATGCCCGCGAAAACATGCTTCCGGGCGTGGAT
ACGCCGGAAGACCTCGAACGCGTTCGCCGCGTGTTGGGGGGCTGA

Protein sequence :
MTQAFTVVIPARYASTRLPGKPLQDIAGQPMIQRVWNQARKSAASRVVVATDDERILAACQGFGAEALLTRAEHNSGTDR
LEEVASRLGLASDAIVVNVQGDEPLIPPALIDQVAANLAAHPEAAIATLAEPIHEVSALFNPNVVKVATDIDGLALTFSR
APLPWARDAFARDRDSLPEGVPYRRHIGIYAYRVGFLADFVAWGPCWLENAESLEQLRALWHGVRIHVADARENMLPGVD
TPEDLERVRRVLGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 4e-36 44
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 3e-36 44
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 1e-35 43