|
Name : PA2653 (PA2653) Accession : NP_251343.1 Strain : Pseudomonas aeruginosa PAO1 Genome accession: NC_002516 Putative virulence/resistance : Unknown Product : transporter Function : - COG functional category : R : General function prediction only COG ID : COG2056 EC number : - Position : 3001873 - 3003198 bp Length : 1326 bp Strand : - Note : Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene) DNA sequence : ATGAACGCAGTGGTGCTGGCGGTGGGGCTGATGCTCGTCCTCAGCCTTTGCCGTGTGCATGTCGTGCTGGCGCTGATCAT CGGCGCGGTGGTCGGCGGACTGTTCGGTGGCCTAGGCCTGGAGGGGACTCTCAAGGCCTTCAACGGCGGCCTCGGCGGGG GTGCCACGGTGGCCCTGTCGTACGCCATGCTCGGCGCCTTCGCCGTGGCCATCGCCCGCTCCGGCGTGGCCCATGCGCTG GCCGACAAGGTCCTGGCGCTGCTCGGCCGGCACGACGAGCAGGGCAAGGGCGCCGGTGCGTTCAAGTGGATCCTGGTCGG CCTGCTGCTCTGCGTGGCGGTATCCTCGCAGAATATCCTGCCGATCCATATCGCCTTCATCCCGCTGCTGGTGCCGCCGC TGCTCTATGTGCTGAGCAAGCTGCAGATCGACCGGCGATTGATCGCCTGCGTCATCACCTTCGGCCTGATCACCCCGTAC ATGTTCCTGCCGGTGGGCTTCGGCAACATCTTCCTCAATGAAATCCTGCTGGCCAACGTGGCGCGCAACGGCGTCGACGT CAGCGGGATCAACGTCACCCACGCCATGTTCATCCCAGCCCTGGGCATGCTCGCCGGGTTGCTCATCGCGGTGCTGTTCA GCTACCGCCGCAAGCGCGTCTACGACTTGCAGCGGATCGAGCAGGCCGAACGCGTCGATGTCAGCTACAACCCGAAGAGC CTGGCGGTGGCCGGGGTATCCATCGTCGCCGCGTTCGTCGCACAGCTGTGGCTGGACTCGATGATCATCGGCGCGCTGGT CGGTTTCGTGGTCTTCTCGCTGTCCGGCGTGGTGCGCTGGAAGGAGACCGACGACCTGTTCACCGAAGGCATGAAGATGA TGGCCACCATCGGTTTCATCATGATCGCCGCGGCCGGTTTCGCCGAGGTGATGAAGGCCACCGGCGAGGTGCAGAGCCTG GTCGACGCCTCGGTGGCCTGGATCGGCAACAGCAAGGCGGTCGGCGCCATGCTGATGCTGCTGGTCGGCCTGCTGGTCAC CATGGGCATCGGCTCGTCGTTCTCCACCGTGCCGATCATCGCCGCGATCTTCGTCCCGCTGGCGGTGCAACTGGGCTTCA GCCCGCTGGCCATCGTCAGCATCGTCGGCACCGCCGGCGCGCTGGGGGATGCAGGTTCTCCGGCGTCGGACTCGACCCTT GGGCCGACCTCCGGGCTCAACGTCGACGGCCAGCACAATCACATCTGGGACACCGTGGTGCCGACCTTCCTGCACTACAA CCTGCCGTTGCTGGTGTTCGGCTGGGCCGCCGCGATGTTGCTCTGA Protein sequence : MNAVVLAVGLMLVLSLCRVHVVLALIIGAVVGGLFGGLGLEGTLKAFNGGLGGGATVALSYAMLGAFAVAIARSGVAHAL ADKVLALLGRHDEQGKGAGAFKWILVGLLLCVAVSSQNILPIHIAFIPLLVPPLLYVLSKLQIDRRLIACVITFGLITPY MFLPVGFGNIFLNEILLANVARNGVDVSGINVTHAMFIPALGMLAGLLIAVLFSYRRKRVYDLQRIEQAERVDVSYNPKS LAVAGVSIVAAFVAQLWLDSMIIGALVGFVVFSLSGVVRWKETDDLFTEGMKMMATIGFIMIAAAGFAEVMKATGEVQSL VDASVAWIGNSKAVGAMLMLLVGLLVTMGIGSSFSTVPIIAAIFVPLAVQLGFSPLAIVSIVGTAGALGDAGSPASDSTL GPTSGLNVDGQHNHIWDTVVPTFLHYNLPLLVFGWAAAMLL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CpC231_1474 | YP_005683838.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 8e-77 | 60 |
| CpI19_1481 | YP_005685924.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 8e-77 | 60 |
| Cp1002_1472 | YP_005681739.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 6e-77 | 60 |
| cpfrc_01481 | YP_003783881.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 6e-77 | 60 |
| BJAB07104_00352 | YP_008207817.1 | putative permease | Not tested | AbaR25 | Protein | 2e-72 | 52 |
| BJAB0868_00356 | YP_008211682.1 | putative permease | Not tested | AbaR26 | Protein | 2e-72 | 52 |
