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Name : gabD (PA0265) Accession : NP_248956.1 Strain : Pseudomonas aeruginosa PAO1 Genome accession: NC_002516 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase I Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 299522 - 300973 bp Length : 1452 bp Strand : + Note : Product name confidence: class 2 (High similarity to functionally studied protein) DNA sequence : ATGCAACTCAAAGATGCCAAGCTGTTCCGTCAACAAGCCTACGTCGATGGCGCCTGGGTGGATGCCGACAACGGCCAGAC CATCAAGGTGAACAACCCGGCCACCGGCGAGATCATCGGCAGCGTGCCGAAGATGGGCGCCGCCGAGACCCGCCGCGCCA TCGAGGCTGCCGACAAGGCCCTGCCGGCCTGGCGTGCGCTGACCGCCAAGGAGCGCGCCAACAAGCTGCGCCGCTGGTTC GACCTGATGATCGAGAACCAGGACGACCTGGCCCGCCTGATGACCATCGAGCAGGGCAAGCCGCTGGCCGAGGCCAAGGG CGAGATCGCCTACGCCGCCTCCTTCCTCGAATGGTTCGGCGAAGAAGCCAAGCGCATCTACGGCGACACCATTCCCGGCC ACCAGCCGGACAAGCGCATCATCGTGATCAAGCAGCCGATCGGCGTGACCGCGGCCATCACGCCGTGGAACTTCCCCTCG GCGATGATCACCCGCAAGGCCGGCCCGGCCCTGGCCGCCGGCTGCACCATGGTGCTCAAGCCTGCTTCGCAGACCCCGTA TTCCGCCCTGGCCCTGGCCGAACTGGCAGAGCGCGCCGGCATTCCGAAGGGCGTGTTCAGCGTGGTCACCGGTAGCGCCG GCGAAGTCGGCGGCGAGCTGACCAGCAACCCGATCGTGCGCAAGCTGACCTTCACCGGTTCCACCGAAATCGGCCGCCAA CTGATGGCCGAGTGCGCCCAGGACATCAAGAAGGTGTCCCTGGAGCTGGGCGGCAACGCGCCGTTCATCGTGTTCGACGA CGCCGACCTGGACGCCGCCGTCGAGGGCGCGCTGATTTCCAAGTACCGCAATAACGGCCAGACCTGCGTCTGCGCCAACC GCCTGTACGTGCAGGACGGCGTGTACGACGCCTTCGTCGACAAGCTGAAGGCCGCCGTGGCCAAGCTGAACATCGGCAAC GGCCTGGAAGCCGGCGTGACCACCGGTCCGCTGATCGACGCCAAGGCCGTGGCCAAGGTCGAGGAACACATCGCCGACGC GGTCTCCAAGGGCGCCAAGGTGGTTTCCGGCGGCAAGCCGCACGCCCTCGGCGGCACCTTCTTCGAGCCGACCATCCTGG TCGACGTGCCGAAGAACGCCCTGGTGTCCAAGGACGAGACCTTCGGCCCGCTGGCGCCGGTGTTCCGCTTCAAGGACGAG GCCGAGGTCATCGCCATGTCCAACGACACCGAGTTCGGCCTGGCGTCCTACTTCTACGCCCGCGACCTGGCCCGCGTGTT CCGCGTCGCCGAGCAACTGGAGTACGGCATGGTCGGCATCAACACCGGCCTGATCTCCAACGAAGTGGCGCCGTTCGGCG GCATCAAGGCCTCGGGCCTGGGCCGCGAAGGTTCCAAGTACGGGATCGAGGACTACCTCGAGATCAAGTACCTCTGCCTG GGCGGTATCTGA Protein sequence : MQLKDAKLFRQQAYVDGAWVDADNGQTIKVNNPATGEIIGSVPKMGAAETRRAIEAADKALPAWRALTAKERANKLRRWF DLMIENQDDLARLMTIEQGKPLAEAKGEIAYAASFLEWFGEEAKRIYGDTIPGHQPDKRIIVIKQPIGVTAAITPWNFPS AMITRKAGPALAAGCTMVLKPASQTPYSALALAELAERAGIPKGVFSVVTGSAGEVGGELTSNPIVRKLTFTGSTEIGRQ LMAECAQDIKKVSLELGGNAPFIVFDDADLDAAVEGALISKYRNNGQTCVCANRLYVQDGVYDAFVDKLKAAVAKLNIGN GLEAGVTTGPLIDAKAVAKVEEHIADAVSKGAKVVSGGKPHALGGTFFEPTILVDVPKNALVSKDETFGPLAPVFRFKDE AEVIAMSNDTEFGLASYFYARDLARVFRVAEQLEYGMVGINTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCL GGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 5e-167 | 69 |
