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Name : pscJ (PA1723) Accession : NP_250414.1 Strain : Pseudomonas aeruginosa PAO1 Genome accession: NC_002516 Putative virulence/resistance : Virulence Product : type III export protein PscJ Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4669 EC number : - Position : 1864134 - 1864880 bp Length : 747 bp Strand : + Note : Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa) DNA sequence : ATGAGGCGAACGGTGAAAGGTCTGTCGCGCATGGCGCTCCTGGCGCTGGTCCTGGCGTTGGGCGGGTGCAAGGTCGAACT CTATACCGGGATCAGCCAGAAGGAAGGCAACGAGATGCTGGCGCTGTTGCGTTCGGAGGGCGTTTCCGCGGACAAGCAGG CGGACAAGGATGGCACCGTGCGCCTGCTGGTGGAGGAATCGGATATCGCCGAGGCGGTGGAGGTGCTCAAGCGCAAGGGC TATCCGCGGGAGAACTTCTCCACGCTGAAGGATGTGTTTCCCAAGGACGGGCTGATTTCCTCGCCCATCGAAGAGCGCGC GCGGCTCAACTACGCCAAGGCCCAGGAGATTTCCCATACCCTTTCCGAGATCGATGGCGTGCTGGTGGCGCGGGTCCATG TGGTGCTGCCCGAGGAGCGCGACGGACTGGGCAGGAAGTCCTCGCCGGCATCGGCCTCGGTGTTCATCAAGCACGCCGCC GACGTGCAACTGGATGCCTACGTGCCGCAGATCAAGCAACTGGTGAACAACGGCATCGAAGGACTCAGCTACGACCGCAT CAGCGTGGTCCTGGTGCCGTCGGCCGGGGTCCGCCAGGTCCCGCTGGCGCCACGCTTCGAGAGTGTCTTCTCGATCCAGG TGGCGGAGCACTCGCGCGGACGCCTGCTCGGCCTGTTCGGCCTGCTGCTGGCGTTGCTGCTGGCGAGCAACCTGGCGCAG TTCTTCTGGCACCGGCAACGGGGCTGA Protein sequence : MRRTVKGLSRMALLALVLALGGCKVELYTGISQKEGNEMLALLRSEGVSADKQADKDGTVRLLVEESDIAEAVEVLKRKG YPRENFSTLKDVFPKDGLISSPIEERARLNYAKAQEISHTLSEIDGVLVARVHVVLPEERDGLGRKSSPASASVFIKHAA DVQLDAYVPQIKQLVNNGIEGLSYDRISVVLVPSAGVRQVPLAPRFESVFSIQVAEHSRGRLLGLFGLLLALLLASNLAQ FFWHRQRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscJ | AAO18027.1 | LscJ | Virulence | TTSS locus | Protein | 2e-79 | 82 |
| hrcJ | AAB05080.1 | HrcJ | Virulence | Hrp PAI | Protein | 3e-29 | 43 |
| hrcJ | AAC35801.1 | putative hrp type III secretion pathway protein | Virulence | Hrp PAI | Protein | 4e-28 | 42 |
| hrcJ | AAB49174.1 | HrcJ | Virulence | Hrp PAI | Protein | 5e-27 | 42 |
| XC_3009 | YP_244077.1 | HrcJ protein | Virulence | Hrp PAI | Protein | 1e-35 | 42 |
| hrcJ | NP_636607.1 | HrcJ protein | Virulence | Hrp PAI | Protein | 1e-35 | 42 |
| YPO0263 | YP_002345344.1 | type III secretion system apparatus lipoprotein | Virulence | Not named | Protein | 2e-37 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pscJ | NP_250414.1 | type III export protein PscJ | VFG0218 | Protein | 3e-94 | 100 |
| pscJ | NP_250414.1 | type III export protein PscJ | VFG0409 | Protein | 1e-71 | 77 |
| pscJ | NP_250414.1 | type III export protein PscJ | VFG0051 | Protein | 6e-36 | 46 |
