Gene Information

Name : pscF (PA1719)
Accession : NP_250410.1
Strain : Pseudomonas aeruginosa PAO1
Genome accession: NC_002516
Putative virulence/resistance : Virulence
Product : type III export protein PscF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1862764 - 1863021 bp
Length : 258 bp
Strand : +
Note : Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)

DNA sequence : 
ATGGCGCAGATATTCAACCCCAACCCGGGGAATACCCTCGATACCGTGGCCAATGCCCTGAAGGAGCAGGCCAACGCAGC
GAACAAGGACGTCAACGACGCGATCAAGGCCTTGCAGGGGACCGACAATGCCGACAACCCGGCGCTGCTGGCCGAGCTGC
AACACAAGATCAACAAGTGGTCGGTCATCTACAACATCAACTCGACGGTGACCCGTGCGCTGCGCGACCTGATGCAAGGC
ATCCTGCAGAAGATCTGA

Protein sequence : 
MAQIFNPNPGNTLDTVANALKEQANAANKDVNDAIKALQGTDNADNPALLAELQHKINKWSVIYNINSTVTRALRDLMQG
ILQKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscF AAO18031.1 LscF Virulence TTSS locus Protein 3e-23 74

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pscF NP_250410.1 type III export protein PscF VFG0214 Protein 2e-33 100
pscF NP_250410.1 type III export protein PscF VFG0405 Protein 2e-19 69