Gene Information

Name : pscQ (PA1694)
Accession : NP_250385.1
Strain : Pseudomonas aeruginosa PAO1
Genome accession: NC_002516
Putative virulence/resistance : Virulence
Product : type III secretion system protein
Function : -
COG functional category : N : Cell motility
COG ID : COG1886
EC number : -
Position : 1843218 - 1844147 bp
Length : 930 bp
Strand : -
Note : Product name confidence: class 2 (High similarity to functionally studied protein)

DNA sequence : 
ATGAACGGTGCGGACCTCGACCTGCCGCTCGCCAGCCGCGCCGAACTGGATCTCCAGCGACGTCTCGCACGTTGCCGTCG
CCACTATGTCGGCAACGCTTTGCAAGCGCGCCTGGACATCGCCCAGGCCGCCCCCGACGTCGATCTCGAACTGAGCCTGG
CGTGGGACGGCCTGCCCCTGCGCTTTCTCTGCCAGGCCCCGGCGCTGGCCCGCTGGCTCGCGCCGAACCTGCAGGAGGCA
GCCTTCGCCAGCCTGCCGGCGGCCCTGCAACTGGCCTTGCTGGAGCGCGAAGGCAACGTCTTTCCCGGCCTGGTCTGGTA
CGGCCTGAGCCCGGCGCAACCACGCGCTGCGATGGGCCTGCGTCTGAGCCTGGAACGCGACGACCAGCGCCTGGCGCTCT
GGCTCGACGGCGATCCCGCGACGCTGCTGGCACGCCTGCCGCCGCGCCCCTCGGCGCAACGCCTGGCCATACCGCTGCGC
CTGTCGCTGCAATGGCCCGGCCTGCCGCTGGACGCCAGCGAGCTGCGCACCCTGGAGCCCGGCGACCTGTTGCTGCTGCC
TGCCGGTCATCGCCCCGACGCAGCGCTGCTGGGGGTTCTCGAAGGACGCCCCTGGGCGCGCTGCCAACTCCACTCCACGC
AACTGGAACTGCTCGACATGCACGACACCCCCTCCCTCGCCGACGGCGAGGACCTGCACGAACTCGACCAACTGCCGATC
CCGGTCAGCTTCGAGGTCGGCCGCCGCACCCTGGACCTGCATACCCTCTCCACCCTGCAGCCAGGCTCGCTGCTCGATCT
CGACAGTGCCCTGGACGGCGAAGTGCGCATCCTCGCCAACCAGCGCTGCCTCGGTATCGGCGAACTGGTCAGGCTCCAGG
ATCGGCTCGGGGTGCGCGTAACCCGCCTGTTCGGACACGACGAAGCATGA

Protein sequence : 
MNGADLDLPLASRAELDLQRRLARCRRHYVGNALQARLDIAQAAPDVDLELSLAWDGLPLRFLCQAPALARWLAPNLQEA
AFASLPAALQLALLEREGNVFPGLVWYGLSPAQPRAAMGLRLSLERDDQRLALWLDGDPATLLARLPPRPSAQRLAIPLR
LSLQWPGLPLDASELRTLEPGDLLLLPAGHRPDAALLGVLEGRPWARCQLHSTQLELLDMHDTPSLADGEDLHELDQLPI
PVSFEVGRRTLDLHTLSTLQPGSLLDLDSALDGEVRILANQRCLGIGELVRLQDRLGVRVTRLFGHDEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscQ AAO18041.1 LscQ Virulence TTSS locus Protein 1e-44 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pscQ NP_250385.1 type III secretion system protein VFG0189 Protein 3e-110 100