Gene Information

Name : PA1692 (PA1692)
Accession : NP_250383.1
Strain : Pseudomonas aeruginosa PAO1
Genome accession: NC_002516
Putative virulence/resistance : Virulence
Product : translocation protein in type III secretion
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4794
EC number : -
Position : 1842299 - 1842565 bp
Length : 267 bp
Strand : -
Note : Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene)

DNA sequence :
ATGAGCAGCGCCGACATCCTCCACTTCACCAACCAGACCCTGTGGCTGGTGCTGGTCCTGTCGCTGCCGCCGGTACTGGT
CGCGGCCCTGATCGGCACCCTGGTATCGCTGGTCCAGGCACTCACCCAGATCCAGGAGCAGACCCTCGGCTTCGTCGCCA
AGCTGGTGGCCGTGGTGGTGGTACTGTTCGCCACCAGCGGCTGGCTGGGCGGCGAGCTGTACCGTTTCGCCGAAATGACC
CTGCTGAAGGTGCCGCTGGTGCGATGA

Protein sequence :
MSSADILHFTNQTLWLVLVLSLPPVLVAALIGTLVSLVQALTQIQEQTLGFVAKLVAVVVVLFATSGWLGGELYRFAEMT
LLKVPLVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscS AAO18039.1 LscS Virulence TTSS locus Protein 8e-14 78
hrcS AAB06006.1 HrcS Virulence Hrp PAI Protein 0.057 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PA1692 NP_250383.1 translocation protein in type III secretion VFG0187 Protein 5e-17 100
PA1692 NP_250383.1 translocation protein in type III secretion VFG0395 Protein 3e-11 75