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Name : pscU (PA1690) Accession : NP_250381.1 Strain : Pseudomonas aeruginosa PAO1 Genome accession: NC_002516 Putative virulence/resistance : Virulence Product : translocation protein in type III secretion Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4792 EC number : - Position : 1840468 - 1841517 bp Length : 1050 bp Strand : - Note : Product name confidence: class 2 (High similarity to functionally studied protein) DNA sequence : ATGAGCGCCGAGAAGACCGAGCAGCCCACGGCGAAGAAGCTGCGCGACGCCCGCCGGCAAGGCCAGGTGGTGAAGAGCAA GGAAATTGTCTCCAGCGCGTTGATCCTGTCGCTGGTGGCGCTGCTGATGGGCTTTTCCGACTACTACCTGGAGCATCTCG GCAAGCTGCTCCTGCTGCCCGCCGAGTACATCGACCTGCCGTTTCGCCAGGCGCTGGAGACCATCCTGGAGAACCTTCTC CAGGAGCTCCTCTACCTGCTGGCGCCGGTCCTGCTGGTCGCGGCGCTGGTGGTGGTGCTCAGCCATGTCGGCCAGTACGG TTTCCTGCTCAGCCTCGACAGCGTCAAGCCGGACCTGAAGAAGATCAACCCGGTGGAGGGCGCGAAGAAGATCTTCTCCA TCCGGAGCCTGGTGGAGTTCCTCAAGTCGACCCTGAAGGTCGCCCTGCTCTCCCTGCTGGTCTGGTTGACCTTGCAGGGC AACCTGGCCAGCCTCCTGCGGATTCCCGCCTGCGGGCTGGACTGCGTGGCACCGGTGAGCGGGCTGATGCTCAGGCAACT GATGCTGGTCTGCGCGGTCGGCTTCCTGGCGATTGCCGTCGCCGACTACGCCTTCGAACGCCACCAGCACTACAAGCAGT TGCGCATGAGCAAGGACGAAGTGAAGCGCGAGTACAAGGAGATGGAGGGCAGTCCGGAGATCAAGAGCAAGCGCCGGCAA TTCCATCAGGAACTGCAATCGAGCAACCTGCGCGCGGATGTCCGGCGCTCCTCGGTGATCGTCGCCAACCCGACCCACGT CGCCATCGGCATACGCTATCGACGCGGCGAAACGCCCCTGCCGCTGGTCACCCTGAAGCACACCGACGCCCTGGCCCTGA GGGTCCGGCGCATCGCCGAGGAAGAAGGAATCCCGGTGCTGCAACGAATTCCGCTGGCACGGGCGCTGCTGCGCGACGGC AATGTCGACCAGTACATACCGGCGGACCTGATCCAGGCCACCGCCGAAGTCCTGCGCTGGCTGGAAAGCCAGCAGACGGA TACGCCCTGA Protein sequence : MSAEKTEQPTAKKLRDARRQGQVVKSKEIVSSALILSLVALLMGFSDYYLEHLGKLLLLPAEYIDLPFRQALETILENLL QELLYLLAPVLLVAALVVVLSHVGQYGFLLSLDSVKPDLKKINPVEGAKKIFSIRSLVEFLKSTLKVALLSLLVWLTLQG NLASLLRIPACGLDCVAPVSGLMLRQLMLVCAVGFLAIAVADYAFERHQHYKQLRMSKDEVKREYKEMEGSPEIKSKRRQ FHQELQSSNLRADVRRSSVIVANPTHVAIGIRYRRGETPLPLVTLKHTDALALRVRRIAEEEGIPVLQRIPLARALLRDG NVDQYIPADLIQATAEVLRWLESQQTDTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscU | AAO18037.1 | LscU | Virulence | TTSS locus | Protein | 8e-90 | 71 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pscU | NP_250381.1 | translocation protein in type III secretion | VFG0185 | Protein | 9e-121 | 100 |
| pscU | NP_250381.1 | translocation protein in type III secretion | VFG0397 | Protein | 3e-87 | 67 |
