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Name : PA1662 (PA1662) Accession : NP_250353.1 Strain : Pseudomonas aeruginosa PAO1 Genome accession: NC_002516 Putative virulence/resistance : Virulence Product : ClpA/B-type protease Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1810751 - 1813384 bp Length : 2634 bp Strand : + Note : Product name confidence: class 3 (Function proposed based on presence of conserved amino acid motif, structural feature or limited sequence similarity to an experimentally studied gene) DNA sequence : ATGAGCATGATCAACGTAGACCTGCAACAACTGATTCAGGCGCTGGATGCCGACACCCGGCGCGACCTCGAAGGCTCGGC CGAGCGCTGCGTAGCCCGTGGCGGCAGCAAGGTACTGGTGGAGGACCTGTTGCTGGGTCTGCTGGAGCGTCCCCAGGGAC TGCTGGCGCGCGCCCTGCAGGATGCCGCGGTGGACGCCGGCGAACTCAACGCCGCGTTGCAAGCGCGGGGCGAGCACAGC GCCTCGCGCAATCCGGTGTTCGCGCCCGAGCTGGTGCAGTGGCTGCAGGATGCGCTGTTGCTGGCCAACCTCGAACTGGG CCGTAGCCAGATCGACCAGGCGGCATTGATCCTGGCCCTGCTACGCAACCCGTTGCGCTATGCCGGCAGCCGCTACCAGC CGCTGCTGGCGCGGCTCGACATCGAGCGGTTGAAGGATTTCGCGCTCTCGCAGCCGCTGGAGGGCGCGCCCAGCGGCAAG CCGGGCGGCGGCGAGTCCCTGTTGCAGCGTTTCACCCACAACCTTACCCAGCAGGCGCGCGACGGCAAGCTCGATCCGGT GCTCTGTCGCGACGGGGCTATTCGCCAGATGGTCGACATCCTGGCCCGTCGGCGGAAAAACAACCCCATCGTGGTCGGCG AGGCTGGCGTCGGCAAGACCGCCATCGTCGAAGGCCTGGCCTCGCGGATCGCCGCAGGGGAAGTGCCGCCGGCGCTGAGG GACGTCGAGCTGTTGTCCCTCGACATGGGCCTGTTGCAGGCCGGTGCCAGCGTGAAGGGCGAGTTCGAGCGGCGCCTGAA AGGCGTCATCGACGAAGTGAAGGCAGCGCCCAGGCCGACCATCCTGTTCATCGACGAGGCCCATACGCTGATCGGCGCGG GCGGTCAGGCCGGCGGCTCGGATGCCGCCAACCTGCTCAAGCCGGCCCTGGCACGTGGCGAGTTGCGCACCATCGCGGCG ACGACCTGGGCCGAATACAAGAAGTATTTCGAGAAGGACCCGGCGCTGGCCCGGCGCTTCCAGCCCGTGCAGTTGCATGA GCCGAGCGTTGCCGAGGCGGTGACGATCCTGCGTGGCCTGGCCCGGGTTTACGAGGAAAGCCACGGTATCTACCTGCGCG ACGACGCGGTGGTGGCCGCCGCCGAACTGTCCGCCCGCTACCTGGCGGGTCGCCAGTTGCCGGACAAGGCCGTCGACGTC CTCGACACCGCCTGTGCGCGGGTGCGCATCAGCCTGGCGGCGGCGCCGGAGAGCCTCGAGCGCCTGCGCGGCGAGCTGGC CGAAGGCGAGCGCCAGCGCCAGGCCCTGCGCCGCGATGCCGAGGCAGGCCTGCCGATCGACCACGATGCCCTGCAGGCGC TGGAGGAGCGCCTGGCCCAGGCGGAAAGCGAGCGGCACGTACAGGAGGACCAGTGGAGCCGCCAGCGCGAACTCGCCGAG CGCCTGCTCGCCCTGCGCCAGCAATTGGCCAGGGCCCGCGAGGCGAACCGGGAAGAGCAGGGCAGCGAGGCGGACGCGGA GGCTTTCCCGGCCGACGAGCATGGCGGTGTCGAAGCCTTGGAAAAGGCCCTTCACGAAACCCGCCAGGCACTCGCCGATG CCCAGGCCCAGGGGCGGCTGGTCAGCTTCGAGGTCTGCCCGCGCCTGGTTGCTGAGGTGATCGGCGCCTGGACCGGCGTA CCGGTGGAACAACTGGCGCGGGAACACAACGCCAAGGTGATGGGGTTCGCCGACGACCTGCGGACGCGGATCCGTGGCCA GGAACAGGCGGTCAGCGCCCTGGACCGCGCGATGCGCGCCACCGCGGCCGGGCTGAACAAGCCCGATGCGCCGGTCGGCG TGTTCCTGCTGGTGGGCCCGAGCGGGGTGGGCAAGACCGAGACCGCGCTGGCGCTGGCCGACCTGCTGTATGGCGGCGAG CGTTTCATCACCACCATCAACATGTCCGAGTTCCAGGAGAAGCACACCGTCTCGCGCCTGATCGGCGCGCCGCCCGGCTA TGTCGGCTATGGCGAGGGTGGCATGCTCACCGAGGCGGTACGCCAGAAGCCCTATTCGGTGATATTGCTGGACGAGGTGG AGAAGGCCGATCCGGACGTGCTCAACCTGTTCTACCAGATCTTCGACAAGGGCGTGGCCAACGATGGCGAAGGGCGCGAG ATCGATTTCCGCAATACCTTGATCCTGATGACCTCCAACCTCGCCAGCGAGCACATCGCCGCGCTTTGCCAGGACGGCGC GCGGCCTTCCGCCGAACTCCTGGAGGAAACCATCCGGCCGGCGCTCAGCCGGCATTTCAAGCCGGCGCTGCTGGCGCGCA TGCGCGTGGTGCCTTACTACCCGGTGGGCGGCCCGGTACTGCGCGAGCTGATCGAGATCAAGCTGCAACGCCTCGGCGAG CGCCTGGCGCGCCGTCAACTGGCTTTCGACTACAGCCAGGCGCTGGTGGGCCACCTGGCCGAGCGTTGCACCCAGAGCGA CAGCGGCGCACGGTTGATCGACCACCTGCTGGACACGCACCTGCTGCCGCTGGTGGCCGACCGTTTGCTGGAAGCGATGG CGCGCGACGAGCGTCTCGAGCGGGTCCATGCGACGCTGGGCGAGCACGGGCGCGTGCTCTGCGAGTTCGCCTGA Protein sequence : MSMINVDLQQLIQALDADTRRDLEGSAERCVARGGSKVLVEDLLLGLLERPQGLLARALQDAAVDAGELNAALQARGEHS ASRNPVFAPELVQWLQDALLLANLELGRSQIDQAALILALLRNPLRYAGSRYQPLLARLDIERLKDFALSQPLEGAPSGK PGGGESLLQRFTHNLTQQARDGKLDPVLCRDGAIRQMVDILARRRKNNPIVVGEAGVGKTAIVEGLASRIAAGEVPPALR DVELLSLDMGLLQAGASVKGEFERRLKGVIDEVKAAPRPTILFIDEAHTLIGAGGQAGGSDAANLLKPALARGELRTIAA TTWAEYKKYFEKDPALARRFQPVQLHEPSVAEAVTILRGLARVYEESHGIYLRDDAVVAAAELSARYLAGRQLPDKAVDV LDTACARVRISLAAAPESLERLRGELAEGERQRQALRRDAEAGLPIDHDALQALEERLAQAESERHVQEDQWSRQRELAE RLLALRQQLARAREANREEQGSEADAEAFPADEHGGVEALEKALHETRQALADAQAQGRLVSFEVCPRLVAEVIGAWTGV PVEQLAREHNAKVMGFADDLRTRIRGQEQAVSALDRAMRATAAGLNKPDAPVGVFLLVGPSGVGKTETALALADLLYGGE RFITTINMSEFQEKHTVSRLIGAPPGYVGYGEGGMLTEAVRQKPYSVILLDEVEKADPDVLNLFYQIFDKGVANDGEGRE IDFRNTLILMTSNLASEHIAALCQDGARPSAELLEETIRPALSRHFKPALLARMRVVPYYPVGGPVLRELIEIKLQRLGE RLARRQLAFDYSQALVGHLAERCTQSDSGARLIDHLLDTHLLPLVADRLLEAMARDERLERVHATLGEHGRVLCEFA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 6e-145 | 46 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 4e-145 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PA1662 | NP_250353.1 | ClpA/B-type protease | VFG2076 | Protein | 2e-147 | 50 |
