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Name : aer (PA1561) Accession : NP_250252.1 Strain : Pseudomonas aeruginosa PAO1 Genome accession: NC_002516 Putative virulence/resistance : Unknown Product : aerotaxis receptor Aer Function : - COG functional category : N : Cell motility COG ID : COG0840 EC number : - Position : 1698382 - 1699947 bp Length : 1566 bp Strand : - Note : Product name confidence: class 2 (High similarity to functionally studied protein) DNA sequence : ATGCGCAACAATCAGCCCATCACCCAGCACGAGCGCGTCTATCCGGCGGAACAACGCCTGATCACCACCACCAATCTCAA AGGCATCATCACCTACTGCAACGAAGCCTTCATCGACATCAGCGGCTTCAGTCGCGAGGAGCTGATGTCCGCGCCGCACA ACCTGATCCGTCACCCCGACGTCCCGCCGGCGGTGTTCGCCCACATGTGGACCACCCTCAAAGCCGGCCGCCCGTGGATG GGGATCGTCAAGAACCGCTGCAAGAACGGCGACCACTACTGGGTCAGCGCCTATGTCACGCCGATCTACGACCAGGGCGC GGTGGTCGGCTACGAGTCGGTGCGGGTCAAGCCGACCGCCGAACAGATCCAGCGCGCCGAGGCCCTCTACCGTCGCCTCG GCGCCGGCAAGCCGGCGATCCCCCGGCGCGACCGCTGGCTGCCGGTACTGCTCGACTGGCTGCCGTTCATCCTGATCAGC CAGATCGGCTTCCTCATCGGTATCTGGCTGAACTCCTGGTGGGGCTTCATCCTCGCCGGCCTGCTCGCCGTTCCGCTCGG CCTGGCCGGACTGCGCTGGCAGAAGCGCGGGCTGAAGCGCCTGATGCGGCTCGCCGAACAGACCACCTCCGACCCGCTGA TCGCGCAGATGTACACCGACAGCCGCGGCGACCAGGCGCGCCTGGAAATGGCCATCCTCAGCCAGGACGCGCGCCTGAAG ACCTGCCTGACGCGCCTGCAGGACACCGCCGAATACCTCACCGAACAGGCGCGCCAGGCCGACACCCTGGCCCACCACAG CTCCGCCGGTCTGGAACAGCAGCGCGCAGAGACCGAACAGGTGGCCACCGCGGTCAACGAGATGGCCGCCACCACCCAGG AAGTGGCGAACAATGTCCAGTTGACCGCCGACGCGACACAGAAGGCCAACGAACTGACCTCGCGCGGCCGCGACATCGCC GCGGAGACGCGCAACGCCATCCAGCGCCTGTCGGAGTCGGTGGGCGAGACCGGGGCCGCGGTGAGTCGCCTGGCCCAGGA CAGCAACGAGATCGGCGGCGTGGTCGATGTGATCAAGGGCATCGCCGACCAGACCAACCTGCTCGCTCTCAACGCCGCCA TCGAGGCGGCGCGGGCCGGCGACCAGGGACGCGGCTTCGCCGTGGTGGCCGACGAAGTGCGCTCGCTGGCGCAACGCACC GCGGCCTCCACCGAGCAGATCCACCATCTGATCGCCAAGTTGCAGAACACCGCCAACGATGCGGTACATACCATGGAGAG CGGCCTGCAGCAGGCCGAAGCCGGGGTCCAGCGGGTGCTGGAAGCCGACAGCGCGCTGGTCGGCATCAGCGAGGCGGTCA GCAACATCACCGAGATGACCACCCAGATCGCCGCCGCCGCGGAGGAACAGAGCGCGGTGGCCGAGGAAATCAACCGCAAC ATCAGCACCATCGCCGCCCTGGCCGAGCAGACCTCCGACGAGGCGCTGCGCACGGCGAAACTGAGCGAGGAACTGACCAC CACCGCGCAGAGCCAGTATTCCCTGGTCGAGCGCTTCAACCGCTGA Protein sequence : MRNNQPITQHERVYPAEQRLITTTNLKGIITYCNEAFIDISGFSREELMSAPHNLIRHPDVPPAVFAHMWTTLKAGRPWM GIVKNRCKNGDHYWVSAYVTPIYDQGAVVGYESVRVKPTAEQIQRAEALYRRLGAGKPAIPRRDRWLPVLLDWLPFILIS QIGFLIGIWLNSWWGFILAGLLAVPLGLAGLRWQKRGLKRLMRLAEQTTSDPLIAQMYTDSRGDQARLEMAILSQDARLK TCLTRLQDTAEYLTEQARQADTLAHHSSAGLEQQRAETEQVATAVNEMAATTQEVANNVQLTADATQKANELTSRGRDIA AETRNAIQRLSESVGETGAAVSRLAQDSNEIGGVVDVIKGIADQTNLLALNAAIEAARAGDQGRGFAVVADEVRSLAQRT AASTEQIHHLIAKLQNTANDAVHTMESGLQQAEAGVQRVLEADSALVGISEAVSNITEMTTQIAAAAEEQSAVAEEINRN ISTIAALAEQTSDEALRTAKLSEELTTTAQSQYSLVERFNR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0512 | NP_230163.1 | methyl-accepting chemotaxis protein | Not tested | VSP-2 | Protein | 2e-77 | 42 |
