Name : VCA0988 (VCA0988) Accession : NP_233372.1 Strain : Genome accession: NC_002506 Putative virulence/resistance : Unknown Product : methyl-accepting chemotaxis protein Function : - COG functional category : N : Cell motility COG ID : COG0840 EC number : - Position : 940679 - 942235 bp Length : 1557 bp Strand : + Note : similar to GB:X61367 PID:48195; identified by sequence similarity DNA sequence : ATGCGCAATAACCAACCTGTTACTCAAAAGGAAGTCACCTATCCACCTCACTTCAATCTTCTTTCGACCACCACTCTCAG CAGTCATATCAAATACGCCAGTAAAGAGTTTTGTGATGTCGCCGGTTACACGCTTGATGAGCTCGTAAACCAACCACATA ACATGGTTCGTCACCCCGATATGCCGCCTGAAGCGTTTAAAGACATGTGGGAACACCTCAAAGCGGGCAAATCTTGGATG GGAATGGTGAAGAATCGCTGCAAAAATGGCGACCATTATTGGGTGGATGCCTTTGCTTCACCGATTAAAGAAAATGGCAA GGTAGTGGAATACCAGTCGGTTCGTTTATGTCCGAGTCGGCAGCATGTCGATAATGCGGATAAGCTCTACAAAGAGATCA AAGCAGGCAAAACACCTTGGCAGTTAAAAATGCCACGCACTCGCCTATGGCAGCGTTTAGGGCTCGGTTTTATCGTAGCG GCAGGCGTCAGTTTTGCGGCGGATCGATTCTTCGCTGGTGCAGGTTTACCATTGATGCTTGTGTTAACCATCCTCATGGC CTATCAATTTACTCGCCGCTTAGAAACCCTTTCACAAGAAGCGCGCAAAGTCTTCGATAACCCACTGATGGAACTGGTTT ACAACGGTCGAGTCGATGATTTATCTGAGATCCAACTCGCGATGAAAATGCGCCAATCCGAACTCAATGCAGTAGTAGGT CGTATTCAAGATTCCAGCATTCAAATTGGTGAGGCAGCCAAAATGTCGTCCCAAAACAGTGCAACGACAGCAGATAATCT TGATGCTCAAACTCGCGAGACCGAGCAGTTAGCCACCGCGATCACTCAGATGAATATCACCGCCACTGAGATTGCGCACA ATGCACAAGCCGCCTCGGATGCCACTGTCCATGCAAAAAATGCCGCTCGAGACGGGATGCATGCGGTCGAGCAAACCGTC GATGCGATAGGTGAAATGGCAAGCCAGATGAAAACTGCGTCTTCTGTGATTGAGCAGCTCTCTTCACAAAGTGCGATGAT TGGTCAAGTCATGGAAGTGATTCAGAGTATTGCTGAGCAAACCAACTTGTTAGCACTGAATGCGGCCATTGAAGCGGCGC GTGCTGGCGATCAAGGACGCGGTTTTGCTGTGGTTGCCGATGAAGTTCGTAAACTCGCTCAGCGCAGCACCGAATCGACG AAAGAGATCCAAGAAGTCATCACCTCAATTCAAACCAGTACCCGCAATGCTGTAGAGACGATTGAGCAAGGTAATAAGCT CTCTGTATCTTGTGTAGACAATGCACATTTATCAGGAGACAAGCTGACAGCTCTACTCTCACAAGTTTCAGATATTACGA TGCGTAATGAGCAAATCGCGACCGCCATCGAAGAAATGGCCAATGTAACGGAAGATATGAACCGTAGTGTGCAATCCATT AGCGATGTCTCAACGGAAACTCTAGGATTAGCCGAAAACACCCAAAATGAGTGTCGTCAATTGGCACACAACCTTGCCCA GCAAACCAGCTTGGTTGCACAGTTCCGCCGAGTATAA Protein sequence : MRNNQPVTQKEVTYPPHFNLLSTTTLSSHIKYASKEFCDVAGYTLDELVNQPHNMVRHPDMPPEAFKDMWEHLKAGKSWM GMVKNRCKNGDHYWVDAFASPIKENGKVVEYQSVRLCPSRQHVDNADKLYKEIKAGKTPWQLKMPRTRLWQRLGLGFIVA AGVSFAADRFFAGAGLPLMLVLTILMAYQFTRRLETLSQEARKVFDNPLMELVYNGRVDDLSEIQLAMKMRQSELNAVVG RIQDSSIQIGEAAKMSSQNSATTADNLDAQTRETEQLATAITQMNITATEIAHNAQAASDATVHAKNAARDGMHAVEQTV DAIGEMASQMKTASSVIEQLSSQSAMIGQVMEVIQSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRKLAQRSTEST KEIQEVITSIQTSTRNAVETIEQGNKLSVSCVDNAHLSGDKLTALLSQVSDITMRNEQIATAIEEMANVTEDMNRSVQSI SDVSTETLGLAENTQNECRQLAHNLAQQTSLVAQFRRV |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
VC0512 | NP_230163.1 | methyl-accepting chemotaxis protein | Not tested | VSP-2 | Protein | 2e-85 | 42 |