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Name : VCA0923 (VCA0923) Accession : NP_233308.2 Strain : Genome accession: NC_002506 Putative virulence/resistance : Unknown Product : methyl-accepting chemotaxis protein Function : - COG functional category : - COG ID : - EC number : - Position : 874526 - 876400 bp Length : 1875 bp Strand : + Note : similar to PID:1255679; identified by sequence similarity DNA sequence : ATGAAATTCAGCCATAAAATTGTTGCTGCGTCGTCTGTACTTCTGCTTGCTACTGTTGCGCTGCTTTCGGGTAGCCAATA CTTCAAAGTCCGAGATGAAATCCGCAGCATGGTTTCTGACAGTGTTGATGAGATTGTCGATGGTGTAAGTAAAACGACCG CCGAAGTCATCAATGGCAGAAAAAGTATCGCGCAATACGCCACTAGCTTGATTGAGAACAATCCTGAACCCGATAATGTG CGCACGATCATCTCGCAACCCTTGATCAAAAACACCTTCCTTTTAGTAGGATTTGGTTTAGAGAAAGACGGTTCGAATAT CAATAACGACCCGAGTTGGAACCCGGGCCCGACTTGGGACCCACGTGTTCGTCCTTGGTATAAAGACGCCAAAAATGCCG GTAAGTTGGTGATTACCGCACCTTACGCCGATTCCGCCAGCGGCGAAATTCTGGTTTCCGTCGCAACGCCAGTCAAAGAC AGTGCAACAGGTCAATTCCTCGGTTCCATCTTTTACGATGTCAGCTTGGCTGAACTCGCTGAACTGGTTAACGAAGTAAA ACTGTTTGATGCGGGTTATGTCTTTATTGTGTCCGAAGATGGCACCACGATCGCCCACCCGAAAAAAGAGTTCAATGGCA AACCCATGTCAGAATTTTTGGGTGAAAGCAAAATCAATGTTGATACCCATCAAGTCATCATCAATGGCAAACCCTATGCA GTCAGCTTCTCCGATGTAGAAGGCGAAGATTGGTATGTCGGTGTGGTGATTGATGAAGAGATTGCTTACGCCGCGCTAGA TGAATTACGAAGAAGTACGCTCATTTTCACTGTGATAGCCCTAGTGATCAGCGTGTTTGTTCTACTGTTTATCGTTCGTG TACTAATGAAACCTCTCGATACTCTTAACGACGCGATTCAAAACGTGGCTTCTGGTGAAGGTGACTTAACTCAGCGTTTG AGCACCAATACCGATGAAGAGTTTGCCAAACTGGCGATTGGTTTTAATACCTTTACTGAAACGCTACAGAAGCAGTTGAT CCAATCCAAAGCGATTGGTGCCGAGATCTTACGCGGTTCAGAATCCACATCAATGACGCTACAACAGTCGGCAGAAGCCA TGCGTTCTCAGCTTCATGAGTTGGAACAGTTGGCGACCGCCATGCATGAAATGGCGACGACGTCTTCAGATGTAGCCAAT AATGCGCAAGGTGCCGCTTCGGCTGCAAAAGTGGCTGACGATGCCGCCGCCGCAGGCACGGATGTGGTTACCAAAACCAC GAAAGCCATTGATACCCTTTCTGCCACTATTGATGCCGCGGTAGACGATGTGAAAGTGCTGGAAAGCGCGACTGCAAACA TTGAAACCGTGCTGAAAGTGATTAACGACATTGCGGATCAAACCAACCTGCTCGCACTCAACGCAGCGATTGAAGCGGCG CGAGCCGGTGAATCTGGCCGCGGCTTTGCGGTGGTCGCCGATGAAGTTCGTACTCTGGCACAGCGTACTCAACAGTCCAC GACGGAAATTCGTAACATGATTGAGAAGCTGCAATCTGGAGCCAATGCGGTTGCGGTTGCCATGAGCCACAGTAAAGATA CGGCGGCCAGTGCGGTCAACCAAGCGCAAGGCGCGAATGAAGCGTTAGAAAAAATCCGCCTTGCGATTCAGCAGATCAGC GATATGAACATTCAAATCGCCTCCGCTGCGGAAGAACAAAGCTTAGTTGCAGAAGAGATCAACAACAACACTGTCAAGAT CAAAGACCTGTCGGATCAAGTTGCTGAATCTGCTGATGAAGCGAACATGTCGATGCAGATCCAAACGGAAAATATCCGCG AGCAGGATGCAATCTTGAATAAATTCAAAGTGTAA Protein sequence : MKFSHKIVAASSVLLLATVALLSGSQYFKVRDEIRSMVSDSVDEIVDGVSKTTAEVINGRKSIAQYATSLIENNPEPDNV RTIISQPLIKNTFLLVGFGLEKDGSNINNDPSWNPGPTWDPRVRPWYKDAKNAGKLVITAPYADSASGEILVSVATPVKD SATGQFLGSIFYDVSLAELAELVNEVKLFDAGYVFIVSEDGTTIAHPKKEFNGKPMSEFLGESKINVDTHQVIINGKPYA VSFSDVEGEDWYVGVVIDEEIAYAALDELRRSTLIFTVIALVISVFVLLFIVRVLMKPLDTLNDAIQNVASGEGDLTQRL STNTDEEFAKLAIGFNTFTETLQKQLIQSKAIGAEILRGSESTSMTLQQSAEAMRSQLHELEQLATAMHEMATTSSDVAN NAQGAASAAKVADDAAAAGTDVVTKTTKAIDTLSATIDAAVDDVKVLESATANIETVLKVINDIADQTNLLALNAAIEAA RAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEKLQSGANAVAVAMSHSKDTAASAVNQAQGANEALEKIRLAIQQIS DMNIQIASAAEEQSLVAEEINNNTVKIKDLSDQVAESADEANMSMQIQTENIREQDAILNKFKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0514 | NP_230165.1 | methyl-accepting chemotaxis protein | Not tested | VSP-2 | Protein | 5e-86 | 46 |
