Gene Information

Name : VCA0855 (VCA0855)
Accession : NP_233241.1
Strain :
Genome accession: NC_002506
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 806378 - 807061 bp
Length : 684 bp
Strand : -
Note : similar to GB:AE000782; identified by sequence similarity

DNA sequence : 
ATGCTGCATTTTCAAAGTATAGAAAAACAGTACTCATTGGGAGTTCAAAGCGTGCCAGCGCTACGTGGTGTGAGCGGTGT
GGTACAGCAAGGCGAGATGTTAGCGCTGTGTGGCCCCTCCGGCTCGGGTAAAAGCACTTTGCTCAACATCTTGGGATTAC
TTGACCCTAATTACCAAGGTGAAGTGGCATTAGAGGGACGTGTATATCCACGTAAGGGTAAGTCTGCCGCCTTACTGCGT
CGTACTCAGTTTGGTTTTGTGTTCCAAAAATTCAACTTAGTATCCGTGATGACGGCGCTAGAGAATGTCGCCTATCCCTT
GATGCTTAATGGTTTTAGCCGTCGTGATCAGCACAAGTTAGCACATGACATGCTAACCAAGGTTGGATTAGAAGCGGTGA
TGCAGCAGCGTCCAGATCATCTTTCCGGTGGTCAGCAGCAGCGTGTAGCGATAGCTCGGGCGTTGGTTCACAACCCGAAA
TTGGTGGTCGCGGATGAGCCTACCGCGAGTCTGGATAGTCAAACAGCCAACCTCGTGATCAGTTTAATGAAAAGTCTTGG
TCATGAGTTAGGCACGACTTTTGTGGTTGCCACTCATGACGGGCGCATGGCAGCTCAGTGCGATCGCACCCTCAATCTGG
TGGACGGACAAATTTCATTGGAGGCGATGCAATGGGCAAGTTGA

Protein sequence : 
MLHFQSIEKQYSLGVQSVPALRGVSGVVQQGEMLALCGPSGSGKSTLLNILGLLDPNYQGEVALEGRVYPRKGKSAALLR
RTQFGFVFQKFNLVSVMTALENVAYPLMLNGFSRRDQHKLAHDMLTKVGLEAVMQQRPDHLSGGQQQRVAIARALVHNPK
LVVADEPTASLDSQTANLVISLMKSLGHELGTTFVVATHDGRMAAQCDRTLNLVDGQISLEAMQWAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-26 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-27 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VCA0855 NP_233241.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-32 47
VCA0855 NP_233241.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 9e-34 43
VCA0855 NP_233241.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-35 41