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Name : VCA0588 (VCA0588) Accession : NP_232978.1 Strain : Genome accession: NC_002506 Putative virulence/resistance : Unknown Product : peptide ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 524830 - 526422 bp Length : 1593 bp Strand : - Note : similar to SP:P33916 PID:405909 GB:U00096 PID:1736845 PID:1788506; identified by sequence similarity DNA sequence : ATGAACGATTGGGTATTGAAGATAGATAACCTGTCGGTGGGCTTTGGTATCGCAGGGCAGGCACGCCCTGTGACGGAAGG GGTAAGCTTAACCATTGCGCGTGGTGAAACGTTGGCTTTGGTGGGAGAAAGTGGCTCGGGAAAATCCGTGACAGCCAACG CGATTTTGCGTTTGTTGCCCAAAGGATCGGCGCACTATTTAAGTGGCAGCATTCATTTTGGCGATGTAGATACCCTGCGC TGCTCAGAGCGCGCGCTGCGCGGCATCCGCGGGGGACGCATAGGGATGATTTTTCAAGAGCCGATGGTCTCGCTTAATCC TCTGCACAAAATTGGAAAACAGTTGGTGGAAACCTTAGCGATCCATCGAGGATTACGTGCAACGGCAGCAGAGCAAAAAG CGATTGAATGGCTTGGCAAGGTGGGGATTCGTCATCCTGAAATTAAGATCAATGCCTATCCGCATGAACTCTCAGGCGGT GAGCGGCAACGTGTGATGATTGCCATGGCGCTAATCAATGAACCCGAGCTACTGATTGCCGATGAACCTACCACAGCATT AGATGTTTCGGTACAAGCACAGATTTTGGATTTACTTAAATCTCTGCAACAAGAATTGGGCATGGCGATGTTGTTCATTA CCCATGATTTGAGCATAGTGCGCCGAATTGCTGACCGAGTGGCAGTGATGCAAAGTGGCCAATTGGTCGAAACTAACGCG TGCCACACTTTGTTTGCTGCGCCTGCACATCCCTATACCCAGCAGTTGATCAATGCCGATCCGCGTGGTGTGCCCGTCCC TACAGCGATGGATGCTCCGACGCTGCTGCAAGCGGAAAAGTTACGGGTGTGGTTTCCAATCAAAGGCGGTTATTTTCGCC GCACTCAAGCCTATATAAAAGCGGTTACAGATATGAGTTTCACCTTGGCCAAAGGGCAATCGTTGGGTTTGGTGGGGGAA AGTGGTTCAGGGAAATCGACCACGGGCATGGCGATTCTCAAGCTTCTCGCCTCACAAGGGGCTATCCGTTTTGCAGGGCA AGATCTGCAAGCTCTCAAACGCCGTGAAATGCTGCCGTATCGCAGTAAAATGCAGGTGGTGTTTCAAGACCCATATTCTG CGCTTAATCCTCGAATGTCGGTGGCGCAAGTGATAGGCGAGGGTTTACGCGTGCATAGCCAGCTTAATGATGACGAGATT GATCACGCGATTTGCGCGGTGATGCAGGAAGTCGGCCTAGATGTAGACACTCGGCATCGCTATCCCAATGAATTTTCTGG TGGTCAACGGCAGCGTATCGCGATTGCGCGTGCGTTGGTGCTCAAGCCTGAGTTCATATTGCTTGATGAGCCAACCTCAT CGCTAGACCGAACTGTACAAGCGCAAGTACTGGATTTGCTGAAAGATTTGCAGCAGAAATACCAATTAACCTATCTGTTT ATTAGCCATGATCTCGCGGTGATCCGCGCTTTATGTCACCACACCATAGTGATGAAAGCGGGGGAGATTGTCGAACATGG CGAAACTCAAAGCCTATTTGAGAATCCAAGTCACCCGTATACGCAGCAGCTAGTGCGTCTTTCTCTGTTGTAA Protein sequence : MNDWVLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLPKGSAHYLSGSIHFGDVDTLR CSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHRGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGG ERQRVMIAMALINEPELLIADEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNA CHTLFAAPAHPYTQQLINADPRGVPVPTAMDAPTLLQAEKLRVWFPIKGGYFRRTQAYIKAVTDMSFTLAKGQSLGLVGE SGSGKSTTGMAILKLLASQGAIRFAGQDLQALKRREMLPYRSKMQVVFQDPYSALNPRMSVAQVIGEGLRVHSQLNDDEI DHAICAVMQEVGLDVDTRHRYPNEFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQQKYQLTYLF ISHDLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLVRLSLL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-69 | 42 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-69 | 42 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 3e-69 | 42 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-69 | 42 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 3e-85 | 42 |
