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Name : VCA0282 (VCA0282) Accession : NP_232678.1 Strain : Genome accession: NC_002506 Putative virulence/resistance : Unknown Product : IS5 transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3039 EC number : - Position : 301670 - 302650 bp Length : 981 bp Strand : + Note : similar to GB:J01735; identified by sequence similarity DNA sequence : ATGAGTCATCAACTGACTTTCGCAGACGGTGAGTTTTCCAATAAACGTCGACAAACCCGCAAAGAGCTCTTCCTCGCCAG AATGGAGAAGCTCCTACCATGGTCTCAGTTGCTCGCGGTGATCGAACCCTTTTATCCCAAGGCGGGCAATGGCCGCCGCC CTTATCCTCTCGAAACCATGTTCCGCATCCACTGTATGCAGCAGTGGTACAGCTTAAGTGACGAAGCGATGGAAGATGCA CTCTATGAGATCGCGTCCATGCGGTTATTTGCCCATCTTTCGCTGGACAGAGCCATTCCCGACCGCACTACCATCATGAA CTTCCGCCACTTGTTAGAGCAGCATCAGCTGGGACGCAGTGTGTTCGAGCCGATCAATCAATGGCTCAGCGAGCGCGGCG TGCTGATGAAGCAAGGCACGTTGGTCGATGCGACGATTATCGAAGCGCCCAGCTCGACCAAGAACAAAACCAACCAACGT GATCCCGAAATGCACCAGACCAAGAAAGGCAATGAGTGGCACTTCGGTATGAAGGCACATATTGGTGTGGATGCCAAAAG TGGCCTCACTCATACACTGGTGACTACTGCCGCTAACGAGCATGATCTGAATCAATTGAGCAACCTGCTACACGGTGATG AAGAATTCGTCTCCGGTGATGCAGGCTACCAAGGTGCACACAAGCGCGACGAGCTGAAGGGGGCAGACGTTGATTGGCTG ATAGCCGAACGTCCCGGTAAAGTTCGCGCCCTGAAAAAGCACCCTCGCAAAAACAAAGTGGCCATCCATATCGAATACTT GAAAGCCAGCATTCGGGCCAAAGTCGAGCACCCGTTTCGCATCATTAAATGCCAGTTTGGTTTTATCAAAGCCCGCTACA AAGGCCTGATGAAAAACGACAACCAATTAGCCATGCTATTCACCTTGGCGAATCTGGTCAAAGTCGACCAACTGATACGA CGACAGGCGAGATCTGCCTGA Protein sequence : MSHQLTFADGEFSNKRRQTRKELFLARMEKLLPWSQLLAVIEPFYPKAGNGRRPYPLETMFRIHCMQQWYSLSDEAMEDA LYEIASMRLFAHLSLDRAIPDRTTIMNFRHLLEQHQLGRSVFEPINQWLSERGVLMKQGTLVDATIIEAPSSTKNKTNQR DPEMHQTKKGNEWHFGMKAHIGVDAKSGLTHTLVTTAANEHDLNQLSNLLHGDEEFVSGDAGYQGAHKRDELKGADVDWL IAERPGKVRALKKHPRKNKVAIHIEYLKASIRAKVEHPFRIIKCQFGFIKARYKGLMKNDNQLAMLFTLANLVKVDQLIR RQARSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PSPTO_1407 | YP_003355052.1 | ISPssy transposase or derivative | Not tested | Hrp PAI | Protein | 2e-68 | 58 |
| tnpA | AAF71487.1 | TnpA | Not tested | Hrp PAI | Protein | 2e-68 | 58 |
| tnpA | ACF06175.1 | putative transposase | Not tested | Tn5036-like | Protein | 3e-81 | 56 |
| tnpA | ACF06178.1 | putative transposase | Not tested | Tn5036-like | Protein | 3e-81 | 56 |
| unnamed | AAO33449.1 | putative transposase | Not tested | Not named | Protein | 4e-62 | 56 |
| tnp-33 | AAN62255.1 | transposase | Not tested | PAGI-3(SG) | Protein | 3e-85 | 56 |
