Gene Information

Name : VC0845 (VC0845)
Accession : NP_230493.1
Strain :
Genome accession: NC_002505
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 906379 - 910941 bp
Length : 4563 bp
Strand : +
Note : -

DNA sequence :
ATGAAGATTCGTATTGTATCATTGATAGTTTTGGGTTTTCTTATAGGTTGTAAGCATGAAAGTATAATTACCCCTACTGT
GCCTGCTGATGGTTCGGGTGGTAACGCACTAAATCCTGGTTTGGTAGGTGGTTATTTGCCAGATATTGGTGTTCCGGATC
CCATTATCTCGCTATCCATGACTTTAGATGGTAACTTGAAATTTGATAGTTCTTTACTGTGTAATGATCAAGATGCCTCT
CATTTTCAAATATCACAAAAAGATAATGTCTTTTGTACGATCAACGGGCGTTCAATCGCAACATTTACCGCTCCCTTTGA
CGCTAATAAAAATGGCCGTAACACTGATTCTGAAGTTTTATCTTTAATCTCTGCGGATGAGTACCGGGACTCGCCAGTTC
GACAGGAAAATCTCCAAATTTTAATGAAAAATATGGCGACAATACATGGAGATAAAATATCTCTAGTTTTCCGAAGTACT
CTTGATGCCTTGACATTCGAAAATTATTTACGGCACAATTTAGATCTTCCCAAAGACCAATTTTTAGAAGCAATTACAGA
AAAAATCGCCAATGATAATCAGGTCGATAAGCAACCTTCAACTCATGTGCCTAATATCTCTCCATCATTCACGCCTGGGA
CTTCATCTAATTTGAATAGTCCATTCGTTTCTGCTAATGCTGAAGAGTCTTTGAGCTATATACCGACAGATGTTATTCCT
TCGCTTGGTCGCTTACTTGATAGTCAAGGTCGAGTTATTAATGGTGTTTCATACTTCAGTAATAATACTCGTGGTATTAC
TGGTGTAGATAAAACAGGGGCTATTTTAAATGATGGTTCATTTGAATTTTCGTGGGGAGATATTATTAGCTTTTCAATCG
ATACATTTGAATTAGGTAGTACTCGAGCTAATAAAACTGATTTTTATATCAGTGAATTAGGTAAGGACAATGAGGGTAAG
AATGCTGAAGCTTTGATTCATCGTTATGCAAGTATTGATGATTCTAAGCTTATCATTCCAGATAAAGTTACGCAGATTTT
TTCCCTATACCCTAATGTCATTAATGAAGTGATTTCATTATCATTACCTAATGGCGATATCGAACTTGATATTGGAGATG
GTAAAACTCAGATTGTACCTGGTGAATTCTTTAAGCAGTTTGATTCTGGATTAGCAGCACTTATCGATCAATCTATTTCA
CCTATATCGAGGTTCAAATTTGAAGACAGTTTGCCTAAGAAAAAGTCAGCAATTGATTCTGAATCTTCACAAATCCAAGA
TATTATTAATAAACTCTGGGGTGCAACCGATACCGTACAAGCTAATGGATGGAAAAAAGTCGATCGTTTTCATATTTTTC
ATGACAGTACAAACTTCTACGGTAGTACAGGAAGTGCCCGAGCACAAGCAGCGGTGAATATTGCTAATAGTGCATTTCCA
GTCTTAATGGCTCGTAATGACAATAATTACTGGATTGATTTTGGTAAACCTAAAGCATGGGATTCGAATAGTCTGGCATT
TATTACTGAAGCACCTTCTACAGTTGTGCCTGATAAAGTATCTGAAGATACATCAACCTTTAATTTACCTTTTATTAGTT
TGGGCGAAATTGGTAAAGGCAAGCTGATGGTACTAGGAAATGCGCGATATAACAGTGTCTTAGTCTGTCCTAATGGATTT
AGTTGGGGCGGAACTGTTAAAAATGGTACTTGTAGCTTAAGTAGTGATCGTGATGATATGGCTAATTTTTTTAGTAATGT
CATCCGCTATCTTACGGGAAGTACTTCCAATGATGTTATTGTTGGAACTAATATTCCAGAAGTTTACTTTAAATCATCTG
GCCAAACTATGGGGTCAAAAGCCAATTTTGAACTCGATTCAAGATTCTCTAAGCAAACTCAACAGTTGACTAGTTTCCAT
GATTTAGATGTTAATACTATACCTCTTATTATTATCAATGCATACGACTATAAAGGAAAAAACATAAATAGTCCGTATGA
TATTCCATTAAGTGCTGATGTAGGCAGTCCGAAATTGTCTCGTTCTGATGTCACTGATTTAATTGATTATATAAACAACG
GTGGTAGTGTATTAATGATGGAGACTATCATTAATACAAATAACAGTGAGATTTCTCGTTTATTGGACAGTGCTGGTATT
GCTTTTGGCATTGGAAACAGTGTAGTTGCTGACGGTAATGGCCCGAGTGGAGGCCACCCAGATCGCCCACGTAGTCAGCG
AGAGCACGGTATTTGGGTTATTGAGCGATATGCAGCTGTTGAAGACGAGTCTTCTGGTCAACAGACGCTACCTTATGTGA
TTAATAGTGATGGTTCAATTGAGTGGAAGTATATTGTAGAGAATAGGCCCGATGATAAACCTAAACTTGAAGTCGCGAGT
TGGGTTGAATCTGAAGCTGGAGATAAATTAATTACTCACTATGCATTTATTGATGAGTCTCAGCACTGGAAAAAAGATAT
TTCAGGTAAAATAATCTATAACGTGGCAGGGAAGCCGGAAGTAGATAATGCATCATTATCTTTGGCTAAAAATAAAGTAC
TTGATGCTTTTAAAAACAGTAGTGGCCAGAGAGCCTACTCTGAATGTAAAAATTCTGAGTTTCATTATGAGATTAATTGC
TTAGAATATCGTCCAGGTAATTCAATTCCTATTACTGGTGGTTTGTATGTACCCCGATATACTGATATTAAGTTAGGAGA
GTCTGAAGCCAATGCTATGGTAAAGGCGGCTAATCTTGGTACAAATATTCATGCTTTATATCAGCATGAACGTTATTTCC
GAACTAAAGGAAAGTCGGGAGCCCGTTTAAATAGTGTTGATTTGAATCGAATTTATCAAAATATGTCAGTATGGCTTTGG
AACGACCTTGATTATCGTTATGATGATAAGCAATCCGATGAGCTTGGATTTAAAGTTTTTACACAGTATTTGAATTGTTA
CACTAGTAACAACGCTGGTGGTAATACAACTTGCCCAGAAGAATTGAAAGATGAACTTACTCAGCTAGGTATGATTTATG
ACGAAAAATCAGGAAGCTATGCAGGTCAAATGGATCCAAGTTACCCACTTAATTATATGGAAAAGCCACTGACCCGTTTA
ATGTTAGGGCGCTCATTCTGGGATCTTGATATCAAAGTTGATGTCAGAAAGTACCCCGGTGAAGTCACAACAAGATCAGG
TGGAGGGGATATTACTCTTGACATGCGTAATAATACGGCAGCTTGGTTTGCGGGTAATAGGCAGCCGACAGGGCAGTGGG
CCGAAGCTCATCAGCCTTTTAGTGTTTCAGTCTCAGGAGAAACATCGCCTGTCACCATCACCATTGCATTGGCTGATGAT
TTAACTGGCCGAGAGAAGCATGAGCTTGGTTTAAAGCGTCCTCCTCGCATGAGCAAATCATTTGTTATTGGCGGCGATAG
TCCGAAAATGCAGACTTTTACCGTACCCTATGGTGGGTTAATATATGCACAAGGGGGAAATTCTCAACAGGTCAAACTAA
CATTTTCAGGAACTATAGATGCACCGCTCTATATTGACGGTAAGTGGAGAAACCCTCTTTTATCTGGCGCACCAATTGGT
GAAGTAGTGTCAGACACCTTCATATTTACTGCACCTAAAGCAAATTTAAATGCCGATGGTTATTTGGGGGGGATCGAACA
GTTTGCAAAAGATCTTGATCAATTCTCAGCGGATTTAAACGATTTTTATGCCCGTGATGAAGGTGCGGACGGTGACAAAA
ATCGCAAAGCTACTGATAAGTCAATGCCTAATAATCGTCACCATTTCGTCAATGATGTCGCAATAAGTGTTGGTGCTGCA
CACTCTGGCTATCCGGTCATGAATGATAGTTTTATTACCAGTAGCCGTAGTTTGAACACTATGCCGCTGAACAGCTGGCT
GCTTTGGCATGAGGTCGGGCATAATTCAGCAGAAGCTCCTTTTAATGTTGATGGGGCCACAGAAGTTGTAAACAACTTAC
TTGCCTTATATATGCAAGATCGTCATCAAGGAAAAATGTCTCGTGTAGAACAGGATATCCGTTATGCTTTCGATTTTGTT
AATGCTGAGCATGGGCATGCTTGGGGAGCCGGTGGTGCTGGTGAACGTTTAGTTATGTTTGCGCAACTTAAAGAGTGGGC
AGAAACTGAGTTTGATATAAATGACTGGTATAATGATAAGCTACCTGGTTTTTATATTGAAGAAAGCGGAATAAAAGGTT
GGAACTTGTTTAAACTGATGCATCGGTTAATGAGAAATGAGAACGATGACCAAATCAATATGAAGGGAGAAAATCAATGT
AAGATATCTGGTATTGGTAAAAGTGATCTATTAATGCTTTGTGCATCATATGCCGCTCAGACGGATTTGTCAGAATTTTT
TAAAGCATGGAATCCGGGAAGTAAGGCATTTCTCTATCCAGATGATCCTCAGCCATATTACGAAGGAGGAATAACTCCTT
CTGGGATTCAGAGAGTCAAATCTTTAAAATTGAATCTTCCCCAAAAAAATCCCCTTTCTATAAACAGTGTTACACAACAT
TAG

Protein sequence :
MKIRIVSLIVLGFLIGCKHESIITPTVPADGSGGNALNPGLVGGYLPDIGVPDPIISLSMTLDGNLKFDSSLLCNDQDAS
HFQISQKDNVFCTINGRSIATFTAPFDANKNGRNTDSEVLSLISADEYRDSPVRQENLQILMKNMATIHGDKISLVFRST
LDALTFENYLRHNLDLPKDQFLEAITEKIANDNQVDKQPSTHVPNISPSFTPGTSSNLNSPFVSANAEESLSYIPTDVIP
SLGRLLDSQGRVINGVSYFSNNTRGITGVDKTGAILNDGSFEFSWGDIISFSIDTFELGSTRANKTDFYISELGKDNEGK
NAEALIHRYASIDDSKLIIPDKVTQIFSLYPNVINEVISLSLPNGDIELDIGDGKTQIVPGEFFKQFDSGLAALIDQSIS
PISRFKFEDSLPKKKSAIDSESSQIQDIINKLWGATDTVQANGWKKVDRFHIFHDSTNFYGSTGSARAQAAVNIANSAFP
VLMARNDNNYWIDFGKPKAWDSNSLAFITEAPSTVVPDKVSEDTSTFNLPFISLGEIGKGKLMVLGNARYNSVLVCPNGF
SWGGTVKNGTCSLSSDRDDMANFFSNVIRYLTGSTSNDVIVGTNIPEVYFKSSGQTMGSKANFELDSRFSKQTQQLTSFH
DLDVNTIPLIIINAYDYKGKNINSPYDIPLSADVGSPKLSRSDVTDLIDYINNGGSVLMMETIINTNNSEISRLLDSAGI
AFGIGNSVVADGNGPSGGHPDRPRSQREHGIWVIERYAAVEDESSGQQTLPYVINSDGSIEWKYIVENRPDDKPKLEVAS
WVESEAGDKLITHYAFIDESQHWKKDISGKIIYNVAGKPEVDNASLSLAKNKVLDAFKNSSGQRAYSECKNSEFHYEINC
LEYRPGNSIPITGGLYVPRYTDIKLGESEANAMVKAANLGTNIHALYQHERYFRTKGKSGARLNSVDLNRIYQNMSVWLW
NDLDYRYDDKQSDELGFKVFTQYLNCYTSNNAGGNTTCPEELKDELTQLGMIYDEKSGSYAGQMDPSYPLNYMEKPLTRL
MLGRSFWDLDIKVDVRKYPGEVTTRSGGGDITLDMRNNTAAWFAGNRQPTGQWAEAHQPFSVSVSGETSPVTITIALADD
LTGREKHELGLKRPPRMSKSFVIGGDSPKMQTFTVPYGGLIYAQGGNSQQVKLTFSGTIDAPLYIDGKWRNPLLSGAPIG
EVVSDTFIFTAPKANLNADGYLGGIEQFAKDLDQFSADLNDFYARDEGADGDKNRKATDKSMPNNRHHFVNDVAISVGAA
HSGYPVMNDSFITSSRSLNTMPLNSWLLWHEVGHNSAEAPFNVDGATEVVNNLLALYMQDRHQGKMSRVEQDIRYAFDFV
NAEHGHAWGAGGAGERLVMFAQLKEWAETEFDINDWYNDKLPGFYIEESGIKGWNLFKLMHRLMRNENDDQINMKGENQC
KISGIGKSDLLMLCASYAAQTDLSEFFKAWNPGSKAFLYPDDPQPYYEGGITPSGIQRVKSLKLNLPQKNPLSINSVTQH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
acfD ACK75646.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 100
VC0845 NP_230493.1 hypothetical protein Not tested VPI-1 Protein 0.0 100
acfD ACK75664.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 100
acfD ACK75670.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 100
acfD AAK20802.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 100
VC0395_A0370 YP_001216326.1 lipoprotein Not tested VPI-1 Protein 0.0 100
acfD ACK75649.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 99
acfD ACK75655.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 99
acfD ACK75652.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 98
acfD ACK75658.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 97
acfD ACK75661.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 96
acfD ACK75667.1 accessory colonization factor AcfD Virulence VPI Protein 0.0 96
unnamed CAE85238.1 hypothetical protein Not tested PAI V 536 Protein 0.0 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VC0845 NP_230493.1 hypothetical protein VFG0106 Protein 0.0 100