Gene Information

Name : VC0830 (VC0830)
Accession : NP_230478.1
Strain :
Genome accession: NC_002505
Putative virulence/resistance : Virulence
Product : toxin co-regulated pilus biosynthesis protein Q
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 892495 - 892947 bp
Length : 453 bp
Strand : +
Note : similar to GB:X74730 PID:398402; identified by sequence similarity

DNA sequence :
ATGAAAAAAAACTATTACATAGGTGCATGCATCGCGCTCATATTAAGCGGGCCAACCTTTGCACAAGGAGAGATGCACAA
TACAAATGAGCAGATTGCAGAACAGTCCTCAGTTGATTTAATCGCAGAAATTTATCATTCAGACCGATATGCAGAAACGT
TTGTTGAATCCGAACAGTTCGAACAAGAAGAAAGCACATCAAAAGAACCTATCTTGTTTGTTACACCTTATGATCAATTG
AAAGATAAATTGGAATCTTGGGCTGATTTACACGGTTATGTTGTGAAATGGAATACACAGAAAACGGTTCAGTTCGATAA
TGCGGTGGCTTATGAAGGAGACTTTGAACAAGTTTTAACTGAGTTGGCTAGCGATATTAACCAAATTGGCATAGACATTA
ACTTTAAAATATTTCAAAAAAATAAAGTTATTGTCGTCTATTCAGTGAGATAA

Protein sequence :
MKKNYYIGACIALILSGPTFAQGEMHNTNEQIAEQSSVDLIAEIYHSDRYAETFVESEQFEQEESTSKEPILFVTPYDQL
KDKLESWADLHGYVVKWNTQKTVQFDNAVAYEGDFEQVLTELASDINQIGIDINFKIFQKNKVIVVYSVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tcpQ AAK20787.1 toxin-coregulated pilus biosynthesis protein Q Virulence VPI Protein 9e-55 100
VC0830 NP_230478.1 toxin co-regulated pilus biosynthesis protein Q Virulence VPI-1 Protein 1e-54 100
tcpQ ACK75603.1 toxin co-regulated pilus biosynthesis protein Q Virulence VPI Protein 9e-55 100
tcpQ ACK75643.1 toxin co-regulated pilus biosynthesis protein Q Virulence VPI Protein 9e-55 100
tcpQ ACK75638.1 toxin co-regulated pilus biosynthesis protein Q Virulence VPI Protein 2e-54 99
tcpQ ACK75623.1 toxin co-regulated pilus biosynthesis protein Q Virulence VPI Protein 4e-54 99
tcpQ ACK75633.1 toxin co-regulated pilus biosynthesis protein Q Virulence VPI Protein 3e-54 98
tcpQ ACK75618.1 toxin co-regulated pilus biosynthesis protein Q Virulence VPI Protein 2e-54 98
tcpQ YP_001216311.1 toxin co-regulated pilus biosynthesis protein Q Virulence VPI-1 Protein 4e-54 98
tcpQ ACK75613.1 toxin co-regulated pilus biosynthesis protein Q Virulence VPI Protein 7e-55 98
tcpQ ACK75628.1 toxin co-regulated pilus biosynthesis protein Q Virulence VPI Protein 5e-55 98
tcpQ AAK20757.1 toxin-coregulated pilus biosynthesis protein Q Virulence VPI Protein 3e-54 98
tcpQ CAA45457.1 - Virulence VPI Protein 3e-54 97
tcpQ ACK75608.1 toxin co-regulated pilus biosynthesis protein Q Virulence VPI Protein 2e-53 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VC0830 NP_230478.1 toxin co-regulated pilus biosynthesis protein Q VFG0093 Protein 4e-55 100