Gene Information

Name : VC0829 (VC0829)
Accession : NP_230477.1
Strain :
Genome accession: NC_002505
Putative virulence/resistance : Virulence
Product : toxin co-regulated pilus biosynthesis protein B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 891203 - 892495 bp
Length : 1293 bp
Strand : +
Note : similar to SP:P23476 GB:X64098 PID:398401 PID:48409; identified by sequence similarity

DNA sequence :
ATGAGAAAATACCAACAAGGTGTCGGATTATTGGAGGCGATTTTGGCCTCTGCCGTATTAGGGATGGCATTGGTCGCTGC
TGGGAGTTATTACAAGCGGGAAGCTGAACTCATGATTAAATCCAGTAACGCATTTGATGTTATTGAGTTGTCATCTCAAA
TCCAGCGTTACGCCTCTTTAAGTAAAATTAATAATCGTACTAACCCAATACTCAAAGATAATAAGGCAAAAGAATTTAAA
GATGCGGATTTGAAATGGTTAAAGCTTGAAAACTGCCTCACAGCAGGTGATGTGCCGACAACGGGTAATAATAATGATCT
ACAAGATCAGTTTATTGCTTGTGATGCTGATTATAGGAAAGGTGATCTAAGCTATTTTGGGAGTCAGTTTGAATTCTCAA
CCTATGTACATCCTTCCAACCCGGAAATTCAACGACAAATAAAACAAGTCGTCAGCTATTTTCAATATCGAGGCATGGAA
AGAGCGTTTATTGGCGATGCTGCGGGTTATGTTATCAGTGAGGCCAAGAAAAAAGGATTTAGCGCACAAGACTATCGAAT
CGTACTAATAGAACCTGATCGTGTCGGGTATTTTGAGTCAAATGTTATTAGCTATGAAGAGTTTATAGAAAATCCATCCG
CTCGTGAAAATTTTCTTTTAAAAGCGACGAAAGATAGAACTCTGGCGTTGGCGGTCAGTCTTGCCCAAACCGGAGAAATA
GCAATGCAACGTGATGGTTCCGTTGCATTTTTAGAAGATACTGAGTTGTGTTGGGATACGGCGGCAGGTAGTGCAAAGTC
TTGTCTCTCGGTTCGGTACGATACCGTTGGAAATAAAACAGAACTGGATTTAAAACAGATAGATGTGGTCAGTGCGAAAG
GCCTATCATTTGAAAGTGATGGTAAAACAAAAACACCAGTGGTTTCTACTTATGAGACTTTTCAAGATGGCGGACGGGCT
AAAACCATTAACGCTATTGAATGCCCAACAGGTTTAAATAATCGTTTTGCTGCGGTGGTGAGTTCATTTTCAACTGCTGG
ACAGAATGCAAACTTTAGTTCAGAGAGTGCTAAGGATTCTCAAGGCACAACCCAAAAGGATGGTAGCAAAGGACCACATG
CGCTTCTATCCGGTATATCACTGAACTGGACATTAACGAATAAGGTATGGGATGTAACTGCCTCGATTGGTATCGAGTCC
GGTATATTGCCTACTTCAGGTATCGATTCTGGATCGTTATTACGAAACCCTAAATCATTGTCTTTTATAGCGTTTCAATG
GTGTGAAAATTAA

Protein sequence :
MRKYQQGVGLLEAILASAVLGMALVAAGSYYKREAELMIKSSNAFDVIELSSQIQRYASLSKINNRTNPILKDNKAKEFK
DADLKWLKLENCLTAGDVPTTGNNNDLQDQFIACDADYRKGDLSYFGSQFEFSTYVHPSNPEIQRQIKQVVSYFQYRGME
RAFIGDAAGYVISEAKKKGFSAQDYRIVLIEPDRVGYFESNVISYEEFIENPSARENFLLKATKDRTLALAVSLAQTGEI
AMQRDGSVAFLEDTELCWDTAAGSAKSCLSVRYDTVGNKTELDLKQIDVVSAKGLSFESDGKTKTPVVSTYETFQDGGRA
KTINAIECPTGLNNRFAAVVSSFSTAGQNANFSSESAKDSQGTTQKDGSKGPHALLSGISLNWTLTNKVWDVTASIGIES
GILPTSGIDSGSLLRNPKSLSFIAFQWCEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0829 NP_230477.1 toxin co-regulated pilus biosynthesis protein B Virulence VPI-1 Protein 0.0 100
tcpB AAK20786.1 toxin-coregulated pilus biosynthesis protein B Virulence VPI Protein 0.0 100
tcpB ACK75617.1 toxin co-regulated pilus biosynthesis protein B Virulence VPI Protein 0.0 99
tcpB YP_001216310.1 toxin co-regulated pilus biosynthesis protein B Virulence VPI-1 Protein 0.0 99
tcpB AAK20756.1 toxin-coregulated pilus biosynthesis protein B Virulence VPI Protein 0.0 99
tcpB ACK75612.1 toxin co-regulated pilus biosynthesis protein B Virulence VPI Protein 0.0 99
tcpB ACK75602.1 toxin co-regulated pilus biosynthesis protein B Virulence VPI Protein 0.0 99
tcpB ACK75642.1 toxin co-regulated pilus biosynthesis protein B Virulence VPI Protein 0.0 99
tcpB ACK75637.1 toxin co-regulated pilus biosynthesis protein B Virulence VPI Protein 0.0 99
tcpB ACK75632.1 toxin co-regulated pilus biosynthesis protein B Virulence VPI Protein 0.0 99
tcpB CAA45456.1 - Virulence VPI Protein 0.0 99
tcpB ACK75627.1 toxin co-regulated pilus biosynthesis protein B Virulence VPI Protein 0.0 98
tcpB ACK75622.1 toxin co-regulated pilus biosynthesis protein B Virulence VPI Protein 0.0 98
tcpB ACK75607.1 toxin co-regulated pilus biosynthesis protein B Virulence VPI Protein 0.0 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VC0829 NP_230477.1 toxin co-regulated pilus biosynthesis protein B VFG0092 Protein 0.0 100