Name : VC0535 (VC0535) Accession : NP_230186.1 Strain : Genome accession: NC_002505 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 565832 - 568420 bp Length : 2589 bp Strand : - Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGATGAAATCGAACGCCTCACCGAGCGAGTCTCTTTCGCACCACACCCCGATGATGCAACAGTATTTAAGACTCAAGGC GGAAAACCCAGACATTCTGCTGTTCTATCGCATGGGTGATTTTTACGAACTGTTTTATGACGATGCCAAACGCGCCTCTG AACTGCTAGATATTTCCTTAACCAAACGCGGCGCATCGGCGGGTGAACCCATTCCTATGGCGGGTGTGCCTTTCCATGCC GTGGAAGGTTATTTGGCGAAACTCGTCCAGATGGGGGAATCGGTCGCGATCTGCGAACAGATTGGCGATCCAGCCACCAG CAAAGGCCCCGTTGAGCGCAAAGTAGTGCGGATTGTGACACCGGGAACGGTGACCGATGAAGCCCTGCTCTCAGAGCGAG TCGATAACCTGATCGCGGCGATTTATCACCATAACGGCCGCTTTGGTTATGCAACCATGGATATCACCTCCGGTCGTTTT CAGCTCAGTGAGCCGCAAACCGAAGAAGAGATGGCCGCCGAGCTGCAACGCACTTCGCCTCGTGAACTCTTGTTTCCTGA AGATTTTTCGCCAGTGCATCTAATGGCAAGCCGCCAAGGCAACCGCCGTCGCCCGATTTGGGAATTTGAACTCGATACCG CGAAACAGCAGCTCAACCAGCAATTTGGCACGCGCGATCTGGTTGGCTTTGGGGTTGAGCAAGCAAAACTTGGCTTGTGC GCAGCAGGCTGCTTGATCCAATACGTCAAAGATACTCAGCGTACCGCTTTGCCACACATTCGTTCACTGACTTGGGATCG CCAAGATCAATCGGTGATTTTGGATGCCGCGACGCGGCGCAACCTTGAACTCACTCATAACTTGGCGGGTGGAACAGATA ACACGCTTGCAGAAGTACTCGACCATTGTGCTACCCCCATGGGCAGCCGCATGCTCAAACGTTGGATCCACCAACCGATG CGCGATAACGCCACTCTCAATCAGCGTTTAGATGCGATCACTGAGCTCAAAGAAACCGCTTTGTATGGGGAACTGCATCC CGTGCTCAAACAGATTGGCGATATTGAACGGATCCTCGCCCGTCTAGCGCTGCGTTCAGCGCGGCCGCGCGATTTAGCTC GCCTACGCCATGCCATGCAGCAGTTACCTGAATTGCACTCGGTCATGAGCGAGCTTAAGCAGCCTCACCTTACCGAGCTA CGCACCCATGCCGAGCCAATGGATGAATTGTGCGATTTACTCGAACGTGCGATCAAAGAAAACCCACCCGTGGTGATCCG CGATGGTGGCGTGATCGCCGATGGTTACAGTGCCGAACTCGATGAATGGCGCGATTTAGCCAATGGCGCAACCGAATTTC TGGAACGCTTGGAAGCCGAAGAGCGCGATCGTCACGGCATTGATACCCTGAAAGTGGGTTATAACAATGTGCACGGTTTC TACATTCAAGTGAGCCGGGGTCAGAGCCATTTAGTGCCTCCCCACTATGTACGCCGTCAAACCTTAAAAAATGCTGAGCG TTACATCATCGAAGAACTTAAACAGCATGAAGATAAAGTGCTCAATTCTAAGTCTCGTGCTTTAGCGTTAGAAAAACAGC TGTGGGAAGAGTTGTTCGATTTGCTGATGCCGCATCTTGAGCAGCTGCAACAACTGGCGGCTTCCGTTGCTCAATTGGAT GTGCTGCAAAACCTCGCAGAGCGCGCAGAAAACTTGGAATATTGTCGCCCAACGCTGGTTCAAGAAGCGGGCATTCACAT CCAAGGTGGTCGCCACCCTGTGGTAGAGCGAGTAATGAATGAGCCGTTTATCGCCAACCCGATCGAACTTAATCCACAGC GACGCATGCTGATCATTACTGGTCCGAATATGGGCGGTAAATCGACTTACATGCGTCAAACCGCCTTGATTGCACTGATG GCGCATATCGGTAGTTATGTGCCGGCTGAAAGTGCGTCAATCGGCCCACTAGATCGTATTTTTACCCGTATCGGCGCGTC CGATGATCTTGCGTCCGGCCGCTCAACCTTTATGGTGGAGATGACGGAAACCGCCAATATTTTGCACAATGCGACCCGTA ACAGTTTGGTGTTGATGGATGAGATTGGCCGCGGTACCAGTACTTATGACGGACTCTCGCTCGCTTGGGCGAGTGCCGAG TGGCTTGCCAAAGAGATTGGTGCCATGACGCTGTTTGCTACTCACTATTTTGAGTTAACCGAACTGCCGAATGTGTTACC TCATCTAGCGAATGTTCATTTAGATGCGGTTGAACATGGTGATGGCATCGCCTTTATGCACGCAGTGCAAGAGGGTGCCG CGAGTAAATCGTATGGTTTAGCCGTAGCAGGACTGGCTGGCGTACCCAAGCCCGTGATTAAAAATGCGCGCGCCAAATTA CAACAACTTGAGCTATTAAGCTCACAACCTGCCGAGACTCGTAAGCCAAGCCGCGTCGATATTGCCAACCAGCTGAGCTT AATTCCTGAGCCGAGTGCTGTTGAGCAAGCCTTGGCAGGCGTAGATCCTGACCAGCTCACTCCTCGCCAAGCTCTAGATA TGCTCTATCAATTGAAAAAGCTGCTCTAG Protein sequence : MMKSNASPSESLSHHTPMMQQYLRLKAENPDILLFYRMGDFYELFYDDAKRASELLDISLTKRGASAGEPIPMAGVPFHA VEGYLAKLVQMGESVAICEQIGDPATSKGPVERKVVRIVTPGTVTDEALLSERVDNLIAAIYHHNGRFGYATMDITSGRF QLSEPQTEEEMAAELQRTSPRELLFPEDFSPVHLMASRQGNRRRPIWEFELDTAKQQLNQQFGTRDLVGFGVEQAKLGLC AAGCLIQYVKDTQRTALPHIRSLTWDRQDQSVILDAATRRNLELTHNLAGGTDNTLAEVLDHCATPMGSRMLKRWIHQPM RDNATLNQRLDAITELKETALYGELHPVLKQIGDIERILARLALRSARPRDLARLRHAMQQLPELHSVMSELKQPHLTEL RTHAEPMDELCDLLERAIKENPPVVIRDGGVIADGYSAELDEWRDLANGATEFLERLEAEERDRHGIDTLKVGYNNVHGF YIQVSRGQSHLVPPHYVRRQTLKNAERYIIEELKQHEDKVLNSKSRALALEKQLWEELFDLLMPHLEQLQQLAASVAQLD VLQNLAERAENLEYCRPTLVQEAGIHIQGGRHPVVERVMNEPFIANPIELNPQRRMLIITGPNMGGKSTYMRQTALIALM AHIGSYVPAESASIGPLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATRNSLVLMDEIGRGTSTYDGLSLAWASAE WLAKEIGAMTLFATHYFELTELPNVLPHLANVHLDAVEHGDGIAFMHAVQEGAASKSYGLAVAGLAGVPKPVIKNARAKL QQLELLSSQPAETRKPSRVDIANQLSLIPEPSAVEQALAGVDPDQLTPRQALDMLYQLKKLL |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 68 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
VC0535 | NP_230186.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 72 |