Gene Information

Name : VC0516 (VC0516)
Accession : NP_230167.1
Strain :
Genome accession: NC_002505
Putative virulence/resistance : Unknown
Product : phage integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 548780 - 550021 bp
Length : 1242 bp
Strand : -
Note : similar to SP:P32053 GB:U03737 PID:216669 PID:433349 PID:1033117; identified by sequence similarity

DNA sequence : 
ATGGCAAAAAGAGTAGTCCCTTTAACTAACACCCAAGTAAAACAAGCTAAAGAATCCGACAAAGAATACACTCTCTCTGA
TGGTGATGGCCTTCAATTACGTGTTAAAACGAATGGCACAAAGTTATGGATTCTGAAATACACTCATCCAATAACCAAAA
AAAGAAACAACATAAGCTTTGGTTGTTTTCCTGATGTCTCTCTTGCCGAGGCAAGGAAAAGACGTTCTGAAGCAAAAACT
CTCTTAGCTCTCAATATCGACCCAAAACAGCATAAAGATGAACAGCTCTTAAAAGAAAGAGCGGAGCTTGAAAATACCTT
TGGTAAATATTCTGATAGATGGTTGACACTCAAGAGAGAGAGCGTAAAGCCAGAAACAGCGGATAAAGCTTATCGTGCTC
TTGAGAAACATATCCTACCTAAACTTGGGAATGTCCCCATTCAAGACATCAAACCCAGAACGGTACTAAGTATTCTTGAG
CCAGTAAAAGCACAAGGAACTCTAGAAACAGTTAAAAGACTATGCCGTATAATCAACGAGGTTATGCGTCTTGCTGTAGC
TTCAGGTGACATTGAAGTAAACTACTTAGCAGACATCACCAAGCTCTTTCCGGCCCCTAAACGCCAGCATATGGTAACTA
TCGAACCAGAAAGACTACCAGAGCTCATGCAAGCTATAGCAAATGCAAATATTACACTCGCTACACGATGCTTACTTGAA
TGGCAACTGCATACAATGACAAGACCTATCGAGAGTGCTACAGCACGTTGGCAGGATATCGACTTTAAAAATAAGGTATG
GGTAATACCAGCAGAAAGAATGAAGATGAAGCGCCCCCATACAATTCCGCTTACTGAGCAAACTTTGGCACTTTTGGAAA
TAATGAAACCAATAAGTAGCCATAGAGAATACATTTTTCCAAGTAATAAAAATCCAAAGAGCCATGTTAATAGCCAGAGT
GCGAATATGGCGCTAAAGAGAATGGGGTATAAGGGACAATTGGTCTCTCATGGTCTAAGAGCATTAGCGAGTACAACTCT
TAATGAACAAGGTTTCAATCCAGACATTATTGAAGCAGCACTAGCTCATGTAGACAAGAATGAGGTTAGGAAAGCATACA
ACAGAGCAGAGTATCTCGAACAACGCAGAAAACTCATGAGTTGGTGGAGTAGCCATATAACCTCAGCATCTAATTGCAAT
ACATCTCTTGCTGAAAGAAAAGTGCTTAAGCTAGCTGGTTAG

Protein sequence : 
MAKRVVPLTNTQVKQAKESDKEYTLSDGDGLQLRVKTNGTKLWILKYTHPITKKRNNISFGCFPDVSLAEARKRRSEAKT
LLALNIDPKQHKDEQLLKERAELENTFGKYSDRWLTLKRESVKPETADKAYRALEKHILPKLGNVPIQDIKPRTVLSILE
PVKAQGTLETVKRLCRIINEVMRLAVASGDIEVNYLADITKLFPAPKRQHMVTIEPERLPELMQAIANANITLATRCLLE
WQLHTMTRPIESATARWQDIDFKNKVWVIPAERMKMKRPHTIPLTEQTLALLEIMKPISSHREYIFPSNKNPKSHVNSQS
ANMALKRMGYKGQLVSHGLRALASTTLNEQGFNPDIIEAALAHVDKNEVRKAYNRAEYLEQRRKLMSWWSSHITSASNCN
TSLAERKVLKLAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 0.0 100
int AAK20773.1 integrase Not tested VPI Protein 3e-111 54
int AAK20803.1 integrase Not tested VPI Protein 3e-111 54
unnamed AAA82714.1 integrase Not tested VPI Protein 3e-111 54
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 4e-111 54
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 4e-111 54
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 2e-95 50
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 2e-95 50
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 7e-96 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VC0516 NP_230167.1 phage integrase VFG1092 Protein 1e-95 50