Name : VC0516 (VC0516) Accession : NP_230167.1 Strain : Genome accession: NC_002505 Putative virulence/resistance : Unknown Product : phage integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 548780 - 550021 bp Length : 1242 bp Strand : - Note : similar to SP:P32053 GB:U03737 PID:216669 PID:433349 PID:1033117; identified by sequence similarity DNA sequence : ATGGCAAAAAGAGTAGTCCCTTTAACTAACACCCAAGTAAAACAAGCTAAAGAATCCGACAAAGAATACACTCTCTCTGA TGGTGATGGCCTTCAATTACGTGTTAAAACGAATGGCACAAAGTTATGGATTCTGAAATACACTCATCCAATAACCAAAA AAAGAAACAACATAAGCTTTGGTTGTTTTCCTGATGTCTCTCTTGCCGAGGCAAGGAAAAGACGTTCTGAAGCAAAAACT CTCTTAGCTCTCAATATCGACCCAAAACAGCATAAAGATGAACAGCTCTTAAAAGAAAGAGCGGAGCTTGAAAATACCTT TGGTAAATATTCTGATAGATGGTTGACACTCAAGAGAGAGAGCGTAAAGCCAGAAACAGCGGATAAAGCTTATCGTGCTC TTGAGAAACATATCCTACCTAAACTTGGGAATGTCCCCATTCAAGACATCAAACCCAGAACGGTACTAAGTATTCTTGAG CCAGTAAAAGCACAAGGAACTCTAGAAACAGTTAAAAGACTATGCCGTATAATCAACGAGGTTATGCGTCTTGCTGTAGC TTCAGGTGACATTGAAGTAAACTACTTAGCAGACATCACCAAGCTCTTTCCGGCCCCTAAACGCCAGCATATGGTAACTA TCGAACCAGAAAGACTACCAGAGCTCATGCAAGCTATAGCAAATGCAAATATTACACTCGCTACACGATGCTTACTTGAA TGGCAACTGCATACAATGACAAGACCTATCGAGAGTGCTACAGCACGTTGGCAGGATATCGACTTTAAAAATAAGGTATG GGTAATACCAGCAGAAAGAATGAAGATGAAGCGCCCCCATACAATTCCGCTTACTGAGCAAACTTTGGCACTTTTGGAAA TAATGAAACCAATAAGTAGCCATAGAGAATACATTTTTCCAAGTAATAAAAATCCAAAGAGCCATGTTAATAGCCAGAGT GCGAATATGGCGCTAAAGAGAATGGGGTATAAGGGACAATTGGTCTCTCATGGTCTAAGAGCATTAGCGAGTACAACTCT TAATGAACAAGGTTTCAATCCAGACATTATTGAAGCAGCACTAGCTCATGTAGACAAGAATGAGGTTAGGAAAGCATACA ACAGAGCAGAGTATCTCGAACAACGCAGAAAACTCATGAGTTGGTGGAGTAGCCATATAACCTCAGCATCTAATTGCAAT ACATCTCTTGCTGAAAGAAAAGTGCTTAAGCTAGCTGGTTAG Protein sequence : MAKRVVPLTNTQVKQAKESDKEYTLSDGDGLQLRVKTNGTKLWILKYTHPITKKRNNISFGCFPDVSLAEARKRRSEAKT LLALNIDPKQHKDEQLLKERAELENTFGKYSDRWLTLKRESVKPETADKAYRALEKHILPKLGNVPIQDIKPRTVLSILE PVKAQGTLETVKRLCRIINEVMRLAVASGDIEVNYLADITKLFPAPKRQHMVTIEPERLPELMQAIANANITLATRCLLE WQLHTMTRPIESATARWQDIDFKNKVWVIPAERMKMKRPHTIPLTEQTLALLEIMKPISSHREYIFPSNKNPKSHVNSQS ANMALKRMGYKGQLVSHGLRALASTTLNEQGFNPDIIEAALAHVDKNEVRKAYNRAEYLEQRRKLMSWWSSHITSASNCN TSLAERKVLKLAG |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
VC0516 | NP_230167.1 | phage integrase | Not tested | VSP-2 | Protein | 0.0 | 100 |
int | AAK20773.1 | integrase | Not tested | VPI | Protein | 3e-111 | 54 |
int | AAK20803.1 | integrase | Not tested | VPI | Protein | 3e-111 | 54 |
unnamed | AAA82714.1 | integrase | Not tested | VPI | Protein | 3e-111 | 54 |
VC0847 | NP_230494.1 | phage family integrase | Not tested | VPI-1 | Protein | 4e-111 | 54 |
VC0395_A0372 | YP_001216328.1 | phage family integrase | Not tested | VPI-1 | Protein | 4e-111 | 54 |
VC1758 | NP_231394.1 | phage family integrase | Not tested | VPI-2 | Protein | 2e-95 | 50 |
VC0395_A1357 | YP_001217300.1 | phage family integrase | Not tested | VPI-2 | Protein | 2e-95 | 50 |
VPI2_0001 | ACA01818.1 | phage family integrase | Not tested | VPI-2 | Protein | 7e-96 | 50 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
VC0516 | NP_230167.1 | phage integrase | VFG1092 | Protein | 1e-95 | 50 |