|
Name : VC2731 (VC2731) Accession : NP_232358.1 Strain : Genome accession: NC_002505 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 2902448 - 2903668 bp Length : 1221 bp Strand : - Note : similar to SP:P45780 PID:609627; identified by sequence similarity DNA sequence : ATGGCCGCGTTTGAATACAAAGCGCTGGATGCCAAGGGACGCCATAAAAAAGGCGTGATTGAGGGCGATAATGCACGTCA GGTGCGTCAGCGCCTGAAAGAGCAAAGCCTAGTGCCGATGGAGGTGGTGGAGACTCAAGTCAAAGCCGCGCGCAGTCGCA GCCAAGGTTTTGCGTTTAAGCGTGGGATCAGTACGCCGGATCTGGCGCTGATCACTCGCCAATTGGCGACTTTAGTTCAA TCCGGTATGCCACTGGAAGAGTGTTTACGCGCGGTTGCCGAGCAGTCGGAAAAACCGCGGATTCGCACCATGTTGGTGGC GGTGCGCGCTAAAGTGACCGAAGGTTACACCCTCTCTGATAGTCTTGGCGATTATCCGCACGTGTTTGATGAGCTGTTTC GTTCTATGGTTGCGGCGGGCGAAAAATCTGGCCACCTCGATTCCGTTCTCGAACGTTTAGCTGACTACGCCGAAAACCGC CAGAAAATGCGCTCTAAACTGCAACAGGCCATGATTTACCCTGTGGTGCTGGTGGTGTTTGCGGTCGGTATCGTGGCGTT TTTGTTGGCAGCGGTAGTGCCGAAAATCGTGGGTCAGTTTGTGCAAATGGGGCAAGCCTTGCCGGCATCGACTCAGTTTC TGCTTGATGCCAGCGATTTCCTGCAACATTGGGGGATTTCGCTGCTGGTCGGTCTCTTGATGCTGATTTATCTGGTGCGC TGGTTGCTGACCAAGCCCGATATTCGTTTGCGTTGGGATCGCCGAGTGATTTCCTTGCCTGTGATTGGCAAGATTGCACG CGGTCTGAATACTGCGCGCTTTGCGCGTACGCTGTCGATCTGTACCTCAAGTGCAATCCCGATTCTGGATGGTATGCGCG TTGCGGTGGATGTGATGACCAATCAGTTTGTGAAACAGCAAGTGTTGGCTGCGGCCGAAAACGTACGCGAAGGCTCTAGC CTGCGCAAAGCGCTAGAGCAGACCAAGCTCTTTCCTCCCATGATGCTGCACATGATTGCCAGTGGTGAGCAGAGTGGAGA ATTGGAAGGCATGTTGACGCGCGCTGCGGATAACCAAGACAACAGTTTTGAATCAACGGTCAACATCGCGCTTGGCATTT TTACCCCGGCCTTGATTGCCTTGATGGCGGGGATGGTGCTGTTTATTGTGATGGCGACCCTGATGCCGATTTTGGAAATG AATAACTTAATGAGTCGTTAA Protein sequence : MAAFEYKALDAKGRHKKGVIEGDNARQVRQRLKEQSLVPMEVVETQVKAARSRSQGFAFKRGISTPDLALITRQLATLVQ SGMPLEECLRAVAEQSEKPRIRTMLVAVRAKVTEGYTLSDSLGDYPHVFDELFRSMVAAGEKSGHLDSVLERLADYAENR QKMRSKLQQAMIYPVVLVVFAVGIVAFLLAAVVPKIVGQFVQMGQALPASTQFLLDASDFLQHWGISLLVGLLMLIYLVR WLLTKPDIRLRWDRRVISLPVIGKIARGLNTARFARTLSICTSSAIPILDGMRVAVDVMTNQFVKQQVLAAAENVREGSS LRKALEQTKLFPPMMLHMIASGEQSGELEGMLTRAADNQDNSFESTVNIALGIFTPALIALMAGMVLFIVMATLMPILEM NNLMSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 3e-96 | 55 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-95 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VC2731 | NP_232358.1 | general secretion pathway protein F | VFG2049 | Protein | 1e-93 | 56 |
| VC2731 | NP_232358.1 | general secretion pathway protein F | VFG0181 | Protein | 3e-89 | 49 |
| VC2731 | NP_232358.1 | general secretion pathway protein F | VFG1870 | Protein | 1e-76 | 42 |
