Gene Information

Name : VC0201 (VC0201)
Accession : NP_229858.2
Strain :
Genome accession: NC_002505
Putative virulence/resistance : Virulence
Product : iron(III) ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 208720 - 209505 bp
Length : 786 bp
Strand : +
Note : similar to PID:41440 GB:U00096 PID:1552729 PID:1786345; identified by sequence similarity

DNA sequence :
ATGTTTCAGTTGGCTGATATTCAAATGGTTCGCGGTGGGCGCACCATTTTGGCGATCGATCATTTGACCATTCCGACCCA
TGAGCTGACAGTTGTGCTCGGTCACAACGGTTCTGGCAAATCCACCTTAGTCAGTTTACTGTCGGGCCAACAGTCGCCCG
ATAATGGTCAAGTGACCCTCAATGGTCAATCACTCTCATCGCTGCCGAGTAAAACCCTCGCCAAAGCCGTGGCCTTTTTG
CCGCAGAAATTGCCGACCAGCGCTGGATTAACCGTGCGTGAGTTGGTGCGTTTAGGGCGCTTTCCGTGGCGCGGCACCTT
GGGCCGATGGCGCAAGGAAGATGAGCTGATTATCGATGCGGCACTTGAAAAAACGGGTGTGAGTGGTTTTGCGCATAACT
TGGCGGATGAGCTTTCCGGCGGTGAGCGTCAACGCGCTTGGGTGGCGATGCTGCTTGCGCAGCAATCTCCGGTGTTGATT
TTGGATGAGCCGACGTCGGCGCTTGATGTGCATCACCAATATCAATTGATGGCGCTGCTGGCGGAGCTCAATCAAACCCA
AGGCGTGGGTATTATCGTGATTTTGCATGATCTCAATTTGGCGCTGCGCTACGCGACCCACATTGTGGCGCTTAAGCAGG
GGCAGATCGCCTTTGAAGGCGGTGCTGAATTGTTGCTCGATGAGCAGCGGTTGTCGGATCTGTATCACTCACCGATCCGT
TTGATTGATCACCCGAATCCCATTTCCCACTCTTCTACTAATAAGGTTTCGATCGTATGTGCTTGA

Protein sequence :
MFQLADIQMVRGGRTILAIDHLTIPTHELTVVLGHNGSGKSTLVSLLSGQQSPDNGQVTLNGQSLSSLPSKTLAKAVAFL
PQKLPTSAGLTVRELVRLGRFPWRGTLGRWRKEDELIIDAALEKTGVSGFAHNLADELSGGERQRAWVAMLLAQQSPVLI
LDEPTSALDVHHQYQLMALLAELNQTQGVGIIVILHDLNLALRYATHIVALKQGQIAFEGGAELLLDEQRLSDLYHSPIR
LIDHPNPISHSSTNKVSIVCA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-40 42
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 5e-40 42
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-40 42
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-40 42
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-41 41
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-41 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VC0201 NP_229858.2 iron(III) ABC transporter ATP-binding protein VFG0925 Protein 3e-41 42