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Name : VC0178 (VC0178) Accession : NP_229835.1 Strain : Genome accession: NC_002505 Putative virulence/resistance : Unknown Product : patatin-like protein Function : - COG functional category : R : General function prediction only COG ID : COG3621 EC number : - Position : 179338 - 180405 bp Length : 1068 bp Strand : + Note : similar to SP:P11768 PID:169498 PID:169500 PID:21415; identified by sequence similarity DNA sequence : ATGCCAAATCCACCTGAATATGAACACCTTAAAAACCAAGTCCGAATTCTTAGTTTGAATGGCGGTGGTGCAAGAGGCTT GTTTACTATCAGCTTGTTAGCTGAAATAGAGCGAATCATCGAGGAAAAACAAGGTATTAACGGTTTTAAAGTTGGAGATT ATTTTGACCTGATTACAGGTACTTCTATTGGTGGAATTCTGGCTTTGGGTTTGGCTTATGGAAAGAGCGCCAGAGAACTG GAAGATGTCTTTAGAAAACAAGCTGGGTATATTTTCCCAGAGCAGAAATACCCACGATTTTTCCCAGTTTTTCGCAGACG GTATCGACTGGCCAGAGGTCCACTTTATGATAGTAAGCCATTGGCTAAAACGATAGCCAGTATGGTAGGAGAAGAGAGCA CTTTTAATGATCTGAAGTGTCGAGTTCTAATTCCTACAGTTAATCTTTCTACAGGTAAACCTCAGTTCTTCAAAACGCCC CACAATCCTGAGTTTCATAGGGATGGTCGTATAAAACTAATAGATGCAGCCTTAGCTACCTCAGCTGCTCCCACATATTT TGCTCCTCATTACTGTGTAGACTTAGATTCGTACTTTGCAGATGGGGGATTGGTTGCTAACAATCCAAGTTTTATTGGCT TGCATGAAGTCTTTCGCGATATGGCAACAGACTTTCCTGAAGCAAAGGTTAGCGATGTAAAGATACTAAACGTAGGGACA TTGGGAGAAGAGTACAGTCTTAGCCCTTCTAGTTTGGCCGGGAAGAGTGGATACCTAGGATTATGGGGAATGGGTGAGAG GTTAGTTCTCAGCGCCATGGCAGCGAACCAAGAACTCCATAAAGCAATGTTATTGAGAGAGTTTGCGACACATGATGCTA TAGGAAATTTCGTGCGCTTGGATAACAACATACCTCATGAAGCCGCTAGTGATATCACTTTGGACAACGCTTCTGCAAGC TCGCTCAGTAATTTAGCTAGCCGCGGTAGGCAGTTAGCTACTGAAGAGTTCACTAAAAACAAAGCATTGGCAGATTTTTT CAAAGTACCTGCCCGCAAATTTAAGTAA Protein sequence : MPNPPEYEHLKNQVRILSLNGGGARGLFTISLLAEIERIIEEKQGINGFKVGDYFDLITGTSIGGILALGLAYGKSAREL EDVFRKQAGYIFPEQKYPRFFPVFRRRYRLARGPLYDSKPLAKTIASMVGEESTFNDLKCRVLIPTVNLSTGKPQFFKTP HNPEFHRDGRIKLIDAALATSAAPTYFAPHYCVDLDSYFADGGLVANNPSFIGLHEVFRDMATDFPEAKVSDVKILNVGT LGEEYSLSPSSLAGKSGYLGLWGMGERLVLSAMAANQELHKAMLLREFATHDAIGNFVRLDNNIPHEAASDITLDNASAS SLSNLASRGRQLATEEFTKNKALADFFKVPARKFK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0178 | NP_229835.1 | patatin-like protein | Not tested | VSP-1 | Protein | 1e-139 | 100 |
| unnamed | AAP70299.1 | VC0178-like protein | Not tested | HPI | Protein | 7e-86 | 64 |
