Gene Information

Name : VC1778 (VC1778)
Accession : NP_231413.1
Strain :
Genome accession: NC_002505
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3090
EC number : -
Position : 1928421 - 1928942 bp
Length : 522 bp
Strand : -
Note : -

DNA sequence :
ATGGAGCTTAAGATGTTACGTAAGATAATTAATAATATTGAAGAAATCATTACTGTGCCTCTAATGGCGGCCTTGCTTGC
TGTTTTGACTTGGCAAATTGGTACCCGTTGGCTTCTCAATGATCCTTCTTTGTGGAGTGAAGAGCTTGCCCGATTACTCT
TCATGTATATGTGTTTAGTGGGATGTGCTATCGCCATTAAACGAAGTTCTCACGTCAATATCACTTTTTTCTCTGACAAA
CTTCCTGAAAAGGCGCGCTTGTCTTTAGTCCTATCGTTAGAGATTGCCGTGCTGGTTTCTATTGGTGCAATCATTGTGCT
CGGCTATCAACATGCCCAGCGTAATGCATTCTTTGAATTGATCACATTAGGGATATCGAGTAGCTGGATGAATTATAGCT
TACCTGTGGGTGGCGTGTTTATGGTGTTTAGACAACTCGAAAAAATCTTTAACCTTATGAAGCTGCTACTGGGTGTTAGC
TCATCTGCTTCATTAATTGATCAGCAAGTAACGGAGAGGTAG

Protein sequence :
MELKMLRKIINNIEEIITVPLMAALLAVLTWQIGTRWLLNDPSLWSEELARLLFMYMCLVGCAIAIKRSSHVNITFFSDK
LPEKARLSLVLSLEIAVLVSIGAIIVLGYQHAQRNAFFELITLGISSSWMNYSLPVGGVFMVFRQLEKIFNLMKLLLGVS
SSASLIDQQVTER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1778 NP_231413.1 hypothetical protein Not tested VPI-2 Protein 3e-76 100
VC0395_A1376 YP_001217319.1 hypothetical protein Not tested VPI-2 Protein 3e-76 100
VPI2_0026c ACA01843.1 TRAP-type C4-dicarboxylate transport system small permease component Not tested VPI-2 Protein 2e-76 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VC1778 NP_231413.1 hypothetical protein VFG1111 Protein 8e-77 100