Gene Information

Name : VC1765 (VC1765)
Accession : NP_231400.1
Strain :
Genome accession: NC_002505
Putative virulence/resistance : Virulence
Product : type I restriction enzyme HsdR
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0610
EC number : -
Position : 1905790 - 1908858 bp
Length : 3069 bp
Strand : -
Note : similar to GB:M63891 PID:551948; identified by sequence similarity

DNA sequence :
GTGGTATTTATGGTTAGTAAAACAAATGAACAGGCGCTAGAGGCCGCAATCGAAAAAGGTTTAGCAGGTATTTGTAAAGA
AGAGTTAGCGCTGGGTGAAGCGCCTCTTAATTACAATAATGATCTTTATCTTATTGGCTCTCCAAGTGACTTTGACAAGC
AGTACGCTTTAGATACCCGTTTGTTTTGGCAATTCCTCGAAGATACTCAAGCGAGTGAGTTAGAAAAACTTAAGCGCACC
AGCCCTCACGATTGGCAGAGAAAAATCCTTGAGCGTTTCGATCGTATGATCAAGCGCCATGGTGTTTTGCGACTATTGAA
AAAAGGGCTAGACGTTGACGATGCCTTTCTATCGTTGATGTACCCGGCACCACTCGCCAGTAGTTCTGAGAAGGTAAAAA
AAGATTTTTCTGCCAACCTGTTTAGTGTGACTCGCCAGGTTTGTTATTCCAATGCAAATCCATTGGAAGAAATTGACATG
GTGCTTTTTATCAATGGTATCCCTCTGATTACCCTTGAGCTTAAAAACCCATGGACGGGCCAGAACGCTGTTTATCATGG
TCAAAAGCAGTACCGCGATGATAGAGATGCAAATCAGCCATTGTTGAACTTTGCTCGTTGCTTGGTTCACATGGCGGTCG
ATACCGATGAAGTCTATATGACGACTAAGCTGGCAGGCAAAAATACCTTCTTCCTGCCGTTCAACAAAGGCTTCAACTTT
GGCAAAGGTAACCCGATTAATCCACATGGGCACAAGACGGCCTACTTGTGGCAAGAGGTATTCCGCAAAGAAAGCATCGC
CAATATTATTCAGCACTTTATTCGTCTTGATGGCAGCAGTAAAAAGCAGTTGGACAAACGAACTTTGTTCTTCCCTCGAT
ATCACCAAATGGATGTCGTACGTCGCTTGGTTGATCACTGCTCAGTTAATGGTGTTGGGCAAACGTATTTGATACAGCAC
TCAGCGGGGTCAGGTAAATCTAACTCAATTACATGGGCGGCGTATCAGCTCATCGAAACTTACCCTATTAGCGATGATCT
ACCAGGAAGTAGAGGAAAAGAAATGCCTCTATTCGATTCGGTCATCGTTGTTACTGACCGCCGATTGCTCGATAAGCAGT
TACGCGACAATATAAAAGAGTTCTCTGAAGTGAAGAACATTGTTGCGCCTGCGTTTAAATCGTCAGAACTAAAGTCAGCA
TTAGAGAATGGTAAGAAAATCATCATTACCACCATTCAAAAGTTTCCCTATATTGTCGATGGTATTGCAGACTTAAGTGA
TAGGCGCTTTGCTGTCATCATTGATGAAGCACACAGTTCGCAGGATGGGCATAACCAAGATAAGTTAAATGAAGCAATGG
GGTTTGTTTCGGAGGATGTTTTAGACAAAGCATTACAAAGTGCGAAAAATCGTAAGATGCGCTCAAATGCATCTTACTTT
GCATTCACCGCAACGCCCAAAAACACCACTCTAGAAAAGTTTGGTCAGCGACAAGCAGACGGAACTTATGTTCCTTTTCA
TTTGTACTCGATGAAACAAGCCATCGAAGAAGGGTTTATCCTCGATGTTATTGCCAATTACACGACCTATAAGAGCTACT
ACGAGATTGAAAAATCAATCCAAGATAACCCTGAGTTTGACAGCAAAAAAGCACAGAAGCGCTTACGAGCGTATGTAGAG
GCAAGCCAAGAGACGATAGACACTAAAGCCGAGATCATGCTTGAGCATTTCATCAAGCATGTCGTTAACGGCAAGAAGCT
AAAAGGTAAAGGCAAAGGTATGGTGGTGACTCAAAACATTGAGTCAGCCATACGTTACTATCGGGCACTAACCAGACAGC
TCAATAAAATGGGCAATCCGTTTAAAGTTGCCATTGCATTCTCTGGCTCAAAAGAAGTCGATGGGATTGAGTACACAGAA
GCTGACATTAATGGTTTCCCAGAAGGTGATACCAAAGATTACTTTGATGTGAACTACAAGCGTAAGGAGCCGGACTCTCC
AATCCCTAAGCACGTAGACCAAGATGCTTACCGGTTGCTGGTAGTGGCGAATAAGTATTTAACAGGCTTTGATCAGCCGA
AACTTTGTGCCATGTACGTGGATAAAAAGTTGGCTAGCGTTTTGTGTGTCCAAGCTCTGTCACGCTTAAACCGTTCAGCG
CCAAAGTACGGTAAGAAAACGGAAGATCTGTTTGTGTTGGATTTCTTCAACTCAGTGGATGATATCAAAACCGCATTCGA
CCCTTTCTATACATCCACAACGCTTTCTGAAGCGACAGATGTCAATGTTCTTCATGAGCTAAAAGATGATATGGACGACA
CAGATGTTTATGAGTGGTTTGAAGTTGAGGAGTTCAACAAGCGTTTCTTTGAAGGACGAGAGGCTCAGGACCTAAGCCCA
ATCATTGACATCGCAGCTGCGCGTTTTAACCACGAGTTAGAACTAGAGAACGAGTTTAAAGTCGATTTCAAAGTGAAAGC
CAAGCAGTTTGTGAAAATCTACGGCCAGATTGCATCTATCATGCCTTATGAGGTCGTTCAGTGGGAAAAACTGTTCTGGT
TCTTGAAATTTTTGATTCCGAAGCTTTCCGTCGAAGACCCAGATAAAGAAGCACTAGACTCATTACTAGATTCAGTTGAT
TTGAGCTCTTATGGATTACAAAGGGTTAAGCTTAACCATTCCATCGAGCTAGATGACTCTGAAACTGAGTTAGATCCTCA
AAACCCGAACCCGCGCGGGGCTTATGGTCCTGAAGCTGAGAAAGATCCGTTAGATGAGATCATCAAAATCTTTAACGAAC
GCTGGTTCCAAGGCTGGAGCGCAACACCAGAAGAGCAGAGAGTTAAGTTTGTGAACATTGCTGAGAGCATCCGAAATCAC
CCAGATTTCGAAGCTAAATACCAAAACAACGCAGACCCTCATACGCGAGAGTTAGCGTTTGAAAAGATGTTGAAAGAAAT
CATGCTTCAACGTCGTAAAGACGAGTTAGAGCTCTACAAGCTGTTTGCCCAAGACCCAGCTTTTAAAGCGTCTTGGACGC
AGAGCATGCAGCGTATGGTTGGGATGTAA

Protein sequence :
MVFMVSKTNEQALEAAIEKGLAGICKEELALGEAPLNYNNDLYLIGSPSDFDKQYALDTRLFWQFLEDTQASELEKLKRT
SPHDWQRKILERFDRMIKRHGVLRLLKKGLDVDDAFLSLMYPAPLASSSEKVKKDFSANLFSVTRQVCYSNANPLEEIDM
VLFINGIPLITLELKNPWTGQNAVYHGQKQYRDDRDANQPLLNFARCLVHMAVDTDEVYMTTKLAGKNTFFLPFNKGFNF
GKGNPINPHGHKTAYLWQEVFRKESIANIIQHFIRLDGSSKKQLDKRTLFFPRYHQMDVVRRLVDHCSVNGVGQTYLIQH
SAGSGKSNSITWAAYQLIETYPISDDLPGSRGKEMPLFDSVIVVTDRRLLDKQLRDNIKEFSEVKNIVAPAFKSSELKSA
LENGKKIIITTIQKFPYIVDGIADLSDRRFAVIIDEAHSSQDGHNQDKLNEAMGFVSEDVLDKALQSAKNRKMRSNASYF
AFTATPKNTTLEKFGQRQADGTYVPFHLYSMKQAIEEGFILDVIANYTTYKSYYEIEKSIQDNPEFDSKKAQKRLRAYVE
ASQETIDTKAEIMLEHFIKHVVNGKKLKGKGKGMVVTQNIESAIRYYRALTRQLNKMGNPFKVAIAFSGSKEVDGIEYTE
ADINGFPEGDTKDYFDVNYKRKEPDSPIPKHVDQDAYRLLVVANKYLTGFDQPKLCAMYVDKKLASVLCVQALSRLNRSA
PKYGKKTEDLFVLDFFNSVDDIKTAFDPFYTSTTLSEATDVNVLHELKDDMDDTDVYEWFEVEEFNKRFFEGREAQDLSP
IIDIAAARFNHELELENEFKVDFKVKAKQFVKIYGQIASIMPYEVVQWEKLFWFLKFLIPKLSVEDPDKEALDSLLDSVD
LSSYGLQRVKLNHSIELDDSETELDPQNPNPRGAYGPEAEKDPLDEIIKIFNERWFQGWSATPEEQRVKFVNIAESIRNH
PDFEAKYQNNADPHTRELAFEKMLKEIMLQRRKDELELYKLFAQDPAFKASWTQSMQRMVGM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1765 NP_231400.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 0.0 100
VC0395_A1363 YP_001217306.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 0.0 100
VPI2_0013c ACA01830.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 0.0 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VC1765 NP_231400.1 type I restriction enzyme HsdR VFG1098 Protein 0.0 100