Name : VC1673 (VC1673) Accession : NP_231309.1 Strain : Genome accession: NC_002505 Putative virulence/resistance : Resistance Product : AcrB/AcrD/AcrF family transporter Function : - COG functional category : V : Defense mechanisms COG ID : COG0841 EC number : - Position : 1805807 - 1808920 bp Length : 3114 bp Strand : - Note : similar to GB:AE000657; identified by sequence similarity DNA sequence : TTGAGGAGCGTGGCCATGAGTGAACAGAAGCAGACCCCGCCAGAGAATAATGAGAACCAAGGTGTTGCCGCTTACTTCAT CAATAATCGCGTGATCAGTTGGATGGTTTCGCTGATTTTTTTGATTGGAGGGACGGCCGCATTTTTTAATTTAGGACGTT TGGAAGACCCCGCTTTTACCATTAAAGATGCCATGGTGGTGACCTCTTATCCGGGGGCAACTCCTCAGCAAGTGGAAGAG GAAGTAACTTATCCGCTGGAAAAAGCGATTCAGCAATTAACTTATGTCGATGAGGTGAATTCGATTTCGAGCCGTGGTTT ATCCCAGATCACGGTGACAATGAAAAACAATTATGGCCCGGATGATTTGCCGCAAATCTGGGATGAGCTGCGGCGTAAAG TGAATGATTTAAAAGGCGCTTTACCGCCGGGGGTGAATCCGCCTTTGGTTATCGATGATTTCGGTGATGTGTATGGCATC TTGTTGGCGGTCACTGGCGAAGGTTACAGCTACAAAGAGCTACTTGATTATGTGGATTATCTGCGCCGTGAATTGGAGTT AATTGATGGCGTCAGTAAAGTCTCAGTCAGCGGGCAGCAGCAAGAGCAGGTTTTCATCGAGATCTCGATGAAACGGATCA GCACGCTGGGAATTTCGCCGCAAACCGTCTTCAATCTGCTCTCGACACAAAACTTAGTCTCGGATGCCGGAGCGATCCGG ATCGGCTCTGAGTATATTCGCATTCATCCGACAGGTGAGTTTGACGATGTGGAGAAATTGGGCGACCTGATCCTGAGTGA AAGAGGCGCACAAGGGCTGATTTATCTACGCGATGTGGCCGAAGTTAAACGTGGCTACGTGGAAGTTCCAAGTAACGTTA TCACCTTTAACGGTAAGCTCGCGCTTAACGTGGGGGTCTCGTTTGCTCAAGGCGTCAACGTGGTGGAAGTCGGGCAACGC TTCGATCGCCGTTTGGCCGAGCTCAAATATCAACAACCGATCGGGATTGATATTGCCGAAGTGTATAGCCAGCCCAAAGA AGTCGATAAATCGGTCAGTGGTTTTGTGGTGAGCCTTGGACAAGCGGTCGCCATCGTTATCATCGTATTATTGTTCTTTA TGGGGCTGCGCTCGGGGCTGTTGATTGGTCTTATCCTGCTTTTGACTGTACTGGGCACCTTCATTTTCATGCAGTATTTC AAAATCGACCTACAGCGTATTTCATTGGGCGCGCTGGTTATCGCTTTAGGGATGTTGGTGGATAATGCGATTGTGGTGGT CGAGGGGATTTTGATTGGCACGCAGAAAGGCCGAACGCGCTTGCAAGCTGCAACGGACATTGTCACCCAAACCAAATGGC CACTGCTCGGGGCGACAGTGATTGCCGTGACTGCCTTTGCGCCCATTGGCCTGTCGGAAGATGCAACGGGTGAATACTGT GGAACCTTGTTCACGGTATTGCTTATTTCGCTGATGCTGAGTTGGTTTACGGCCATTTCGCTGACGCCATTTTTTGCCGA TCTGTTCTTCCGTGGTCAGAAAGCGCCAGCCAGCGGTGAAGAAAGCGATCCCTACCAAGGTTTTATCTTTGTGGTCTATC GCCGATTCCTTGAGTTTTGTATGAGGCGCGCTTGGCTAACGATGGGCGTGTTGGTGCTCGGACTTGCAGCGAGTTTGTAT GGCTTTACCAAAGTGAAACAAGCTTTCTTCCCATCATCGACTACCCCTATGTTTATGGTCGATGTTTGGATGCCTGAAGG GACGGATATTCGAGCGACGGATGCCATTTTATTAGAGCTGGAAAAATGGTTGTCGGCTCAAGAAAGTGTCGACAGCGTGA CCACTACCGCAGGCAAAGGTCTACAACGCTTCATGCTGACTTACTCACCAGAGAAAAGTTATGCCGCTTACGGTGAGATC ACCACACGGGTTACGGACTACCAACAGCTCGCTGCCTTGATGGCGCGTTTTCGGGCGCACTTAGACGCCCGCTATCCTCA GATTAACTACAAGCTGAAACAGATTGAGTTAGGGCCAGGTGGCGGAGCCAAAATTGAAGCGCGCATTGTAGGTTCAGACC CAACGGTACTGCGCAGTATCGCAGCGCAAGTGATGGATGTGATGTACGCTGACCCCGGTGCCTACAACATCCGCCACGAT TGGCGTGAACGCACCAAAGTGTTGGAGCCGCAGTTTAATGAAAGCCAAGCGCGTCGTTATGGGATCACCAAGGCGGATGT GGATGAGTTTTTAGCCATGTCATTCTCGGGTAAAACCATAGGGGTGTATCGGGATGGCACCACCTTGATGCCGATTGTGG CACGTTTGCCGGAAGAAGAGCGGGTGGACATTCGTAATATCGAAGGCATGAAAATCTGGAGCCCAGCACTGAGTGAGTAT ATTCCATTGCAGCAAGTGACTCTTGGTTACGAAATGCGTTGGGAAGATCCGCTGATTGTGCGTAAAAATCGTAAGCGCAT GCTGACGGTGATGGCGGACCCAGATTTGTTAGGCGAAGAAACCGCTGCCACGTTACAACAGCGTTTGCAGCCACAGATTG AAGCCATTCCTTTACCGCCGGGTTATTTCCTTGAATGGGGCGGTGAGTATGAGTCATCCGGTGATGCTAAAGCTTCTTTG TTTAAAACCATGCCATTGGGTTATTTGTTCATGTTCCTTATCACCGTATTCTTATTTAACTCGGTGAAGGAGTCGCTGAT CGTTTGGCTGACAGTACCTTTGGCGGTGATCGGGGTGACGACAGGTTTGTTGGCGCTGAATACGCCGTTTGGGTTTATGG CCTTGCTCGGCTTCTTGAGTCTTTCGGGTATGTTACTCAAAAACGGCATTGTGTTACTGGATCAGATCGAAATTGAAATG CACTCCGGCAAAGATCCGTATTTGGCGGTTGTCGATGCGTCTTTGAGCCGTGTTCGCCCCGTCTGTATGGCGGCGGTCAC CACCATACTCGGTATGATCCCATTGCTGCCGGATATTTTCTTCCGGCCTATGGCGGTAACCATCATGTTTGGTTTGGGTT TTGCGACCGTACTGACTCTGATTGTCGTGCCGGTACTGTATCGCTTATTCCATCATGTAAAAGTCCCACAATAG Protein sequence : MRSVAMSEQKQTPPENNENQGVAAYFINNRVISWMVSLIFLIGGTAAFFNLGRLEDPAFTIKDAMVVTSYPGATPQQVEE EVTYPLEKAIQQLTYVDEVNSISSRGLSQITVTMKNNYGPDDLPQIWDELRRKVNDLKGALPPGVNPPLVIDDFGDVYGI LLAVTGEGYSYKELLDYVDYLRRELELIDGVSKVSVSGQQQEQVFIEISMKRISTLGISPQTVFNLLSTQNLVSDAGAIR IGSEYIRIHPTGEFDDVEKLGDLILSERGAQGLIYLRDVAEVKRGYVEVPSNVITFNGKLALNVGVSFAQGVNVVEVGQR FDRRLAELKYQQPIGIDIAEVYSQPKEVDKSVSGFVVSLGQAVAIVIIVLLFFMGLRSGLLIGLILLLTVLGTFIFMQYF KIDLQRISLGALVIALGMLVDNAIVVVEGILIGTQKGRTRLQAATDIVTQTKWPLLGATVIAVTAFAPIGLSEDATGEYC GTLFTVLLISLMLSWFTAISLTPFFADLFFRGQKAPASGEESDPYQGFIFVVYRRFLEFCMRRAWLTMGVLVLGLAASLY GFTKVKQAFFPSSTTPMFMVDVWMPEGTDIRATDAILLELEKWLSAQESVDSVTTTAGKGLQRFMLTYSPEKSYAAYGEI TTRVTDYQQLAALMARFRAHLDARYPQINYKLKQIELGPGGGAKIEARIVGSDPTVLRSIAAQVMDVMYADPGAYNIRHD WRERTKVLEPQFNESQARRYGITKADVDEFLAMSFSGKTIGVYRDGTTLMPIVARLPEEERVDIRNIEGMKIWSPALSEY IPLQQVTLGYEMRWEDPLIVRKNRKRMLTVMADPDLLGEETAATLQQRLQPQIEAIPLPPGYFLEWGGEYESSGDAKASL FKTMPLGYLFMFLITVFLFNSVKESLIVWLTVPLAVIGVTTGLLALNTPFGFMALLGFLSLSGMLLKNGIVLLDQIEIEM HSGKDPYLAVVDASLSRVRPVCMAAVTTILGMIPLLPDIFFRPMAVTIMFGLGFATVLTLIVVPVLYRLFHHVKVPQ |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
VC0395_A1355 | YP_001217299.1 | AcrB/AcrD/AcrF family transporter | Not tested | VPI-2 | Protein | 0.0 | 43 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
VC1673 | NP_231309.1 | AcrB/AcrD/AcrF family transporter | BAC0428 | Protein | 0.0 | 100 |
VC1673 | NP_231309.1 | AcrB/AcrD/AcrF family transporter | BAC0519 | Protein | 0.0 | 86 |
VC1673 | NP_231309.1 | AcrB/AcrD/AcrF family transporter | BAC0526 | Protein | 0.0 | 58 |
VC1673 | NP_231309.1 | AcrB/AcrD/AcrF family transporter | BAC0425 | Protein | 0.0 | 43 |