Gene Information

Name : VC1456 (VC1456)
Accession : NP_231099.1
Strain :
Genome accession: NC_002505
Putative virulence/resistance : Virulence
Product : cholera enterotoxin subunit B
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1566967 - 1567341 bp
Length : 375 bp
Strand : -
Note : similar to GB:K01170 SP:P01556 GB:D30052 GB:D30053 GB:X58785; identified by sequence similarity

DNA sequence : 
ATGATTAAATTAAAATTTGGTGTTTTTTTTACAGTTTTACTATCTTCAGCATATGCACATGGAACACCTCAAAATATTAC
TGATTTGTGTGCAGAATACCACAACACACAAATATATACGCTAAATGATAAGATATTTTCGTATACAGAATCTCTAGCTG
GAAAAAGAGAGATGGCTATCATTACTTTTAAGAATGGTGCAATTTTTCAAGTAGAAGTACCAGGTAGTCAACATATAGAT
TCACAAAAAAAAGCGATTGAAAGGATGAAGGATACCCTGAGGATTGCATATCTTACTGAAGCTAAAGTCGAAAAGTTATG
TGTATGGAATAATAAAACGCCTCATGCGATTGCCGCAATTAGTATGGCAAATTAA

Protein sequence : 
MIKLKFGVFFTVLLSSAYAHGTPQNITDLCAEYHNTQIYTLNDKIFSYTESLAGKREMAIITFKNGAIFQVEVPGSQHID
SQKKAIERMKDTLRIAYLTEAKVEKLCVWNNKTPHAIAAISMAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1456 NP_231099.1 cholera enterotoxin subunit B Not tested CTX Protein 4e-54 100
ctxB YP_004937110.1 cholera enterotoxin subunit B Virulence CTX Protein 2e-52 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VC1456 NP_231099.1 cholera enterotoxin subunit B VFG0108 Protein 1e-54 100
VC1456 NP_231099.1 cholera enterotoxin subunit B VFG2038 Protein 3e-46 81