Gene Information

Name : atoC (CPj0586)
Accession : NP_300642.1
Strain : Chlamydophila pneumoniae J138
Genome accession: NC_002491
Putative virulence/resistance : Virulence
Product : 2-component regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 675347 - 676507 bp
Length : 1161 bp
Strand : +
Note : -

DNA sequence : 
ATGGCGATTAAAAATATACTTGTTGTTGATGACGAGCCCCTACTCAGAGATTTCCTCTCGGAACTTCTTACCTCACAGGG
ATTCATCCCAGACACTGCTGAAAACTTAAGAAATGCTCTCCAAATGATCCGAAGTCGAGACTATGACCTTGTCATCTCAG
ACATGAGTATGCCTGACGGCTCTGGTCTTGATTTAATCAAAATTATAAAGCAAAGCTCCCCCCACACGCCCGTCCTTGTA
GTCACTGCTTACGGAAGCATAGAGAACGCCGTAGAGGCTATGCACCAAGGGGCATTCAACTACTTAACAAAACCTTTTTC
TTCTGAAGCACTTTTTGCCTTTATCTCTAAAGCTGAAGAACTTAAGAACCTAGTCCATGAGAATCTCTTTCTACATTCTC
AGACAACACCAGATTCACACCCTCTGATTGCAGAAAGCAAGGCTATGAAAGATCTTCTTGCCATAGCAAAAAAAGCAGCT
TCAAGCTCAGCAAATATATTCATTCACGGAGAATCGGGATGCGGAAAGGAAGTCCTCTCCTTTTTTATCCACCACAACTC
TCCTCGAGCCAACCACCCCTATATTAAAGTTAACTGCGCAGCAATTCCTGAAACTCTCTTAGAATCAGAACTTTTTGGCC
ATGAAAAGGGAGCATTTACAGGAGCAACTACAAAGAAGGCAGGACGTTTTGAACTTGCCCATAAAGGAACCCTCTTATTA
GATGAAATCACCGAAGTCCCAGTAAACCTTCAAGCAAAACTCCTGAGAGCTATCCAAGAAAAAGAAATCGAACACCTTGG
AGGAACCAAGACCCTCTCCGTAGATGTTCGCATCTTAGCGACCTCAAACCGAAAGCTTAAAGAAGCTATCGATGATAAAA
GCTTCCGACAAGATCTGTATTACCGGTTGAATGTCATCCCTCTACACCTCCCCCCTCTAAGAGACCGACAGGACGACATC
CTCCCTCTGGCGAACTACTTCCTAAATAAGTTCTGCCGCATGAACAATACTCCTCTGAAAACCCTCTCTCCTAAAGCTCA
AGAGCTCCTCCTTAACTACCCCTGGCCAGGCAATATTCGAGAGCTCTCCAATGTTCTGGAACGTGTGGTTATCCTAGAGA
ACACCTCCCTACTCACCGAAGACATGCTCGCTTTAGCTTGA

Protein sequence : 
MAIKNILVVDDEPLLRDFLSELLTSQGFIPDTAENLRNALQMIRSRDYDLVISDMSMPDGSGLDLIKIIKQSSPHTPVLV
VTAYGSIENAVEAMHQGAFNYLTKPFSSEALFAFISKAEELKNLVHENLFLHSQTTPDSHPLIAESKAMKDLLAIAKKAA
SSSANIFIHGESGCGKEVLSFFIHHNSPRANHPYIKVNCAAIPETLLESELFGHEKGAFTGATTKKAGRFELAHKGTLLL
DEITEVPVNLQAKLLRAIQEKEIEHLGGTKTLSVDVRILATSNRKLKEAIDDKSFRQDLYYRLNVIPLHLPPLRDRQDDI
LPLANYFLNKFCRMNNTPLKTLSPKAQELLLNYPWPGNIRELSNVLERVVILENTSLLTEDMLALA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 3e-62 41
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 3e-62 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
atoC NP_300642.1 2-component regulator BAC0467 Protein 1e-75 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
atoC NP_300642.1 2-component regulator VFG1249 Protein 1e-79 45
atoC NP_300642.1 2-component regulator VFG1214 Protein 4e-72 44
atoC NP_300642.1 2-component regulator VFG0116 Protein 7e-64 42