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Name : XFa0003 (XFa0003) Accession : NP_061659.1 Strain : Genome accession: NC_002490 Putative virulence/resistance : Unknown Product : topoisomerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : - Position : 1012 - 2994 bp Length : 1983 bp Strand : + Note : - DNA sequence : ATGAAGCTGATGATTATTGAATCCCCCGGCAAGATTGAAAAGCTGTCAACCATCCTTGGCGACGGCTGGAAGATCGCAGC GAGCGTGGGGCATGTGCGGGATTTACCGCAAAAAGAAATGGGCGTTGCTGCGCCTGATTTCAAACCCTCTTACGAGTTGA CGGAACGCGGCGAAGGCGTAGTTGCTAAGTTGAAAAACTTGCTCAAGCAGGCCGATAGCGTGTATCTGGCGACTGACCCA GACAGAGAAGGCGAAGCGATTAGCTGGCACTTGCAGCAGTGCTTGAAACTGTCCAATCCACTGCGCGTGACGTTCAACGA GATTACCGCGAACGCGGTAAAAGCGTCCCTGGTAGCACCGCGAACGATTGACGTGAAGCGGGTAGCGGCGCAGGAAGCGC GGCGCGTCCTTGACCGCCTGGTGGGCTACATGGTCAGCCCTGAATTGAGCCGTCTAACTGGCAAACGTCTATCGGCTGGG CGGGTGCAAAGCCCTGCTGTGCGCTTAGTCGTGGAACGCGAGCGGGAGATTAAGGCATTCAAGGTGACGAACCACTTTGG CGCAATGCTGTTTTTCGCGGACGCGAAAACTAGCGGCGAGTGGTCGGCTGAATGGCTAACGAAACCGAAGTTCGTTGCCG AAGACAACCCGTATTTCATGGACAGGGATTTTGCTGCTGCCGTGGCTCAAGTCAAGGCGGTAGTCGTCAAGTCGTTTGAC GAAAGCGAAGCCAAGCGCAGTCCGCCGCCACCGTTCACCACGTCCACCATGCAACAGGCCGCAAGTGTGACCTTGGGCGT TGACCCCAAAGCCGCAATGGACGCCGCGCAAAAACTCTATGAGCAAGGCCACATCACCTATCACCGCACGGATAACCCGA ACGTGTCGGATGAGTCGCTAGGCGACATTTACGCGGTGTCCGTCAAGCTCGGCCTGGACATAGCCGAGAAACCGCGCAAG TTCAAAGCCCCAGCGGGCGCACAAGTCGGCCATCCGGCAGTGACCCCTACACATTGGGAAGTCGAAGAGGCAGGCGAGAC AAGCGACCAGAAGGCGCTTTACAAGCTGATTCGTCTTCGCGCGATTGCCTGCCAATTGGCCGATGCCCGCTATGCGGTGC GGACTGTGCGCCTTGAGGCGGCGCAGCCGGTCGGCGGCAAGAATGTTGAATTTGAAGCGCGGGGCCGGACACTGATTTAT CAAGGCTGGCTCAAGCTGATTGCAGGCGACCAGACGGAAGAGGAAGACGGCAATGAAAAAGAGTCGTCGAACCCGATTCC CGTTTGCGCACCTGGCGAATGCCTGGACGTGGCGCGCGGCAAGCTACTTGAGAAGAAAACCAAGCCGCCTAGCCATTACA CGCAAGCCACGTTGGTGAAGAAGTTGGAAAGCGAAGGCATCGGAAGACCAGCGACTTACGCCGCCATCATGGACAACATC GTTAGCAGGGGCTACGTCAAAACCGAAAAGAAATATCTGTTTCCCACGGAAACCGGCGAATTGATTGTTGATTCTCTTGT TGGGAAGTTTGAATTCCTTGACTTGGGATTCACGCGCGAGATTGAAGAAAGCCTTGACCGCATCGCCCAGGGCGAATCTG GTTATAAGGCGGTCATCGCCAAAGTGCATGACCAATTGAACATGGAGCTTTCAACATTACAAGTTTCGGCCACACCGAAA CACCCTTGTCAGGAATGCGGAAAGCCGTTGCGGCGCATACCAGGAAAAAACGGGCATTTTTGGGGATGTTCAGGATATCC AGATTGTTCTGTGACGTTTCCGGATGAAGGCGGCAAACCTGGACAAAAGAAGCCTGTAGAGGTATCGAATTTCGCTTGCG TGAAGTGTGGTAATCCCTTGAAACACCTCGTCAAAAAAGGAAAAGGCGGGTATGACTTTTGGGGCTGTTCCGGCTTCAAG GAAGGCTGCAAAGCAACATACGAGGATAAAAAAGGGAAACCAAATTTTGAAAAGGCAAAATGA Protein sequence : MKLMIIESPGKIEKLSTILGDGWKIAASVGHVRDLPQKEMGVAAPDFKPSYELTERGEGVVAKLKNLLKQADSVYLATDP DREGEAISWHLQQCLKLSNPLRVTFNEITANAVKASLVAPRTIDVKRVAAQEARRVLDRLVGYMVSPELSRLTGKRLSAG RVQSPAVRLVVEREREIKAFKVTNHFGAMLFFADAKTSGEWSAEWLTKPKFVAEDNPYFMDRDFAAAVAQVKAVVVKSFD ESEAKRSPPPPFTTSTMQQAASVTLGVDPKAAMDAAQKLYEQGHITYHRTDNPNVSDESLGDIYAVSVKLGLDIAEKPRK FKAPAGAQVGHPAVTPTHWEVEEAGETSDQKALYKLIRLRAIACQLADARYAVRTVRLEAAQPVGGKNVEFEARGRTLIY QGWLKLIAGDQTEEEDGNEKESSNPIPVCAPGECLDVARGKLLEKKTKPPSHYTQATLVKKLESEGIGRPATYAAIMDNI VSRGYVKTEKKYLFPTETGELIVDSLVGKFEFLDLGFTREIEESLDRIAQGESGYKAVIAKVHDQLNMELSTLQVSATPK HPCQECGKPLRRIPGKNGHFWGCSGYPDCSVTFPDEGGKPGQKKPVEVSNFACVKCGNPLKHLVKKGKGGYDFWGCSGFK EGCKATYEDKKGKPNFEKAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| top | ACP28824.1 | DNA topoisomerase I | Not tested | AbaR5 | Protein | 9e-159 | 53 |
| topA | ADI24145.1 | DNA topoisomerase I | Not tested | AbaR1 | Protein | 7e-159 | 53 |
| unnamed | ABR13436.1 | DNA topoisomerase I | Not tested | PAGI-5 | Protein | 1e-129 | 44 |
| topA | AAP84217.1 | topoisomerase I | Not tested | PAPI-1 | Protein | 2e-128 | 44 |
