Gene Information

Name : XF0933 (XF0933)
Accession : NP_298223.1
Strain : Xylella fastidiosa 9a5c
Genome accession: NC_002488
Putative virulence/resistance : Unknown
Product : ferrous iron transport protein B
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0370
EC number : -
Position : 896526 - 898379 bp
Length : 1854 bp
Strand : +
Note : similar to GI|3128348 (percent identity: 52 %/query alignment coverage: 100.3 %/subject alignment coverage: 98.9 %); identified by sequence similarity; ORF located using Glimmer/RBSfinder

DNA sequence :
ATGAGTAAGCATGTGCTCCGGTTGGCTTTGGTGGGTAATCCCAATAGTGGTAAGACGGCGTTGTTTAATCGGTTGACGGG
TAGCCGACAGAAAGTGGCTAATTATCCTGGCGTCACCGTTGAGCGTAAGGAGGGGCATTTCCGCGCATCGTCTGGACGTG
AGTTCGTGATCCTTGATCTGCCGGGTGCTTATAGTTTTCAGCCTGCTAGTCTGGACGAGGCGATTACCCGTGATTTTTGC
CGTGGTTTCTATCCTGGTGAGGCTCCGCCGGATGTGTTGGTTTGTGTGGTTGATGCAACCAATCTGCGGTTGCATTTGCG
TTTTGTACTGGAATTGCTTGAATTAGGGCGGCCAGTCGTGGTGGCGCTGAACATGGTGGATGCTGCACAGCGGCGTGGTA
TCCGTATTGATCGCGTGATTCTGGAGCAGTTGTTGGGCGTGCCAGTGGTGGAAACGGTGGCGGTCCGCCGCTATGGTGCA
CGCGCGCTGCTTGAGCAACTCGACACGGGGGTGATGCCATTGCCTGCACCTGTACCCGCGTTAGCCGCTGGTGACCAGTA
TCACGCGCAAGTGCGTCATATTTTGGAGGCGGCTGTCAAAATGCCCAGTCGCACGTCGCGTGTGGATGACGCATTGGACC
GCTGGCTGTTGCACCCGGTGTTTGGTTTAGTGGTGCTGACTGTTGTGATGTTCTTGATTTTTCAGGCGGTATACGCCTGG
GCTGCGCCGCTGGTGAGTTTGATTGAGGGGGGCACCACGGGGTTGGGTCATTGGGTTGGCAATAGATTGCCGGACGGTCC
ACTACGTAGTTTAGTGGTGGACGGCATCATTACCGGTCTCGGCGGGGTACTGATGTTTTTGCCGCAGATCTTGATCTTGT
TTGCTTTCATCCTGGCGCTTGAGGAGTCTGGTTATTTGCCGCGTGCGGCGTTTTTGCTGGATCGACTGATGGTGCTGGCT
GGGTTGTCTGGGCGTTCGTTCATTCCTCTGTTGTCTAGTTTTGCTTGTGCAGTGCCGGGAATCATGTCAACGCGCAGCAT
TCAGGACCCGCGTGATCGCCTTGTCACCATCCTTGTCGCACCGTTGATGACCTGTTCGGCGCGGTTGCCGGTGTATACGT
TGCTCATTGGTGCGTTCGTGCCGCGTAAATCTTTGTGGGGGCCGATCAATCAACAGGGGTTGGTGCTATTTGGGCTGTAT
ATGGCGGGAATTTTCAGTGCGCTTGTCGTGTCCTGGACGATAAAAAAGTGGCACCGCGGTACAAGTGAGCATCCATTATT
ATTGGAGTTGCCTTCTTATCGATTACCTCACCCACGTGATTTGTTGCTGGGTTTGTGGGAGCGTGCGGTGATTTTTCTTA
AGCGGGTCGGCGGCATTATCTTGGCGCTGACTATTTTGCTGTGGTTCTTGCTGGCGTTTCCGGAGCCACCGTCCGGCGTG
ACTGGCCCAGCGATCTATTACAGCTTTGCTGGAAGAATTGGCCATGTGATGGCGGGATTTTTTGCCCCCTTAGGTTTTAG
CTGGCAAATTTGTATTGCGTTGATCCCCGGGTTGGCTGCCCGCGAGGTCGCGGTTTCTTCGCTGGCAACGGTGTATGCCT
TGTCAGCGTCTAATGAGGAGATGGCTGTACGGGCATTATCGCCGTTGATTCAAGACGGCTGGTCATTAGCGACTGCGCTG
TCGCTCCTGGTCTGGTACATCTATGCACCGATGTGTATTTCCACTCTGGCGACGATTAAGCGAGAGACTAATTCTTGGAA
GCACATGGCTATGACGGCCGGTTATCTGTTTGCTCTGGCTTACCTGGCGGCGTTGGCAACCTACCAGGTGGCATTGTTAC
TGGGGGCAGGTTAA

Protein sequence :
MSKHVLRLALVGNPNSGKTALFNRLTGSRQKVANYPGVTVERKEGHFRASSGREFVILDLPGAYSFQPASLDEAITRDFC
RGFYPGEAPPDVLVCVVDATNLRLHLRFVLELLELGRPVVVALNMVDAAQRRGIRIDRVILEQLLGVPVVETVAVRRYGA
RALLEQLDTGVMPLPAPVPALAAGDQYHAQVRHILEAAVKMPSRTSRVDDALDRWLLHPVFGLVVLTVVMFLIFQAVYAW
AAPLVSLIEGGTTGLGHWVGNRLPDGPLRSLVVDGIITGLGGVLMFLPQILILFAFILALEESGYLPRAAFLLDRLMVLA
GLSGRSFIPLLSSFACAVPGIMSTRSIQDPRDRLVTILVAPLMTCSARLPVYTLLIGAFVPRKSLWGPINQQGLVLFGLY
MAGIFSALVVSWTIKKWHRGTSEHPLLLELPSYRLPHPRDLLLGLWERAVIFLKRVGGIILALTILLWFLLAFPEPPSGV
TGPAIYYSFAGRIGHVMAGFFAPLGFSWQICIALIPGLAAREVAVSSLATVYALSASNEEMAVRALSPLIQDGWSLATAL
SLLVWYIYAPMCISTLATIKRETNSWKHMAMTAGYLFALAYLAALATYQVALLLGAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00309 YP_008207774.1 Fe2+ transport system protein B Not tested AbaR25 Protein 4e-149 63
BJAB0868_00313 YP_008211639.1 Fe2+ transport system protein B Not tested AbaR26 Protein 4e-149 63