Gene Information

Name : XF0724 (XF0724)
Accession : NP_298014.1
Strain : Xylella fastidiosa 9a5c
Genome accession: NC_002488
Putative virulence/resistance : Unknown
Product : phage-related baseplate assembly protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3948
EC number : -
Position : 681178 - 682071 bp
Length : 894 bp
Strand : +
Note : similar to SP|P51767 (percent identity: 46 %/query alignment coverage: 101.0 %/subject alignment coverage: 99.3 %); identified by sequence similarity; ORF located using Glimmer/RBSfinder

DNA sequence :
ATGGATAACACCCTGACCGCCATTGATATCTCCAAGCTGCCCATGCCGGATGTTATCCGGCAAGTGGCCGCAGACGTGAT
TTTGCAAGAAATGCTGGCTGATCTGGCGGCACGTGATCCGACCCTGAAAGACCTCCTGCCCTCAGACCCCATCTACACCC
TGCTGGAAGTGGCCGCCTACCGCGAAGCCGTGCGCCGCTACCAAAGCAACGAAGATGCCAAAGCCGTGATGGTGGCCTTG
GCCAGCGATGCCGACCTGGACAATTTAGCCGCATTATTCCGCGTCAAGCGCCTCATGCTGGATGCAGGTGACCCCTCTAA
GGGCATTGCCCCGACGATGGAGAGTGATGCCGCCTTCCGGCGGCGTATCGTCCTTGCACCGGAAGGCTACAGCGTCGCCG
GTCCAGAAGGCGCTTACATCTACCATGCCATCAGCGCCCATGCCGACGTGCGTGACGTCAGTGCCACCAGTCCAACCCCT
GGGGACGTCATCATCACCGTGCTATCACGCAGCGCCAACGGACAGCCTTCACAAGACGTACTTGACGCCGTGATGGCGGC
GGTTAACCAAGAATCAGTACGACCGATGACCGATCATGTCACCGTACAACCGGCACAGATCACTGACTACCAAGTCCACG
CACGATTGCACACCTACGCCGGACCGGATGCAGCGGTCGTCCTGTCCGAAGCACAGCGCCGCATCACTGCCTACACCACA
GACGCATTCCGCTTAGGCCGTGATATTGCCATCAGTGGCCTGTATGCCGGACTGCATGTTGAAGGCATTCAACGCGTAGA
ACTGCTCACACCACAACAGGGACTGACGATGGACCGTACCCAGGCGGCCCGCTGCACCAACATCACCGTCGTGCATGGGG
GTGTGGATGAATGA

Protein sequence :
MDNTLTAIDISKLPMPDVIRQVAADVILQEMLADLAARDPTLKDLLPSDPIYTLLEVAAYREAVRRYQSNEDAKAVMVAL
ASDADLDNLAALFRVKRLMLDAGDPSKGIAPTMESDAAFRRRIVLAPEGYSVAGPEGAYIYHAISAHADVRDVSATSPTP
GDVIITVLSRSANGQPSQDVLDAVMAAVNQESVRPMTDHVTVQPAQITDYQVHARLHTYAGPDAAVVLSEAQRRITAYTT
DAFRLGRDIAISGLYAGLHVEGIQRVELLTPQQGLTMDRTQAARCTNITVVHGGVDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4613 NP_458695.1 probable phage baseplate assembly protein Not tested SPI-7 Protein 2e-47 44
t4307 NP_807903.1 phage baseplate assembly protein Not tested SPI-7 Protein 2e-47 44