Name : XF0361 (XF0361) Accession : NP_297651.1 Strain : Xylella fastidiosa 9a5c Genome accession: NC_002488 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 369297 - 370712 bp Length : 1416 bp Strand : + Note : unwinds double stranded DNA DNA sequence : ATGTCTGCTCGTCCCGGCTTCCATTCCAATTATCAACGCGAGCCTGGCGATCGTGAAGCGCTGCGTGTTGATCCGTTGCG CGTCCCTCCTCACTCGGTTGAGGCTGAGCAGGCCGTATTGGGGGGGCTGATGTTGGCGCCGGATGCGTTGGATAAGATCA ATGATCGGTTGACGGAGAACGATTTTTACCGTCGTGATCACCGCATGATTTACCGTGCGATCTGCGATTTGTCCAGGAAG ATGCGACCATTCGATGTCGTCACTCTAGGAGAATGGTTTGAGTCGCAGGGGATGCTGGAGGTTGTTGATCATGGTGCTTA TTTGATTGAGCTGGCAAGTACCACGCCCTCGGCCGCCAATATCGTTGCCTATGCTGAAATCGTGCGCGATAAGGCAGTAC TGCGTCAGTTGATTGAGGTTGGAACCAAGATCGTTAACGATGGATTCCAACCAGAGGGCCGCGAAAGTATTGATTTGCTT GCTGAGGCTGAAAAGTCGGTGTTCGGAATTGCCGAGACTGGTGCGCGTGGTCGCATTGATTTTGTGGCAATGCCTGGTGC GTTGAAGGATGCTTTTGAGCAGCTGCGTGATCGTTTTGAGAACGGTAGTAATGTGACCGGGCTTCCAACCGGATATAACG ATTTTGACGCGATGAGCGCAGGTTTACAGCCGACTGATTTGATCGTCTTGGCTGCGCGTCCGGCAATGGGGAAAACAACC TTTGCGTTGAATATCGCTGAGTATGTTGCGATTAAATCGAAAAAGACGGTGGCTGTATTTTCAATGGAAATGTCTGCTGC ACAGTTGGCGATGCGCTTGATTTCTTCTAATGGTCGTATCAATGCGCAGCGTCTGCGTACGGGTCAGCTTGAGGACGAAG ATTGGGCACGTGTGACTGGAGCAATCAAGATGTTGAAGGAGACTAAAATTTTTATTGATGATACCCCTGGTGTGTCGCCA GAGGTATTGCGCTCCAAGTGCCGTCGTTTGAAGCGTGAGCATGATCTTGGTCTAGTGGTGGTCGATTATCTGCAGTTGAT GTCTGTCCCTGGGAACAGTGAGAACCGTGCTACCGAGATCTCGGAAATTTCGCGCTCTCTCAAGGGGTTGGCTAAGGAGT TGAATGTTCCAGTGATTGCATTGTCACAGTTGAACCGTTCTTTGGAGACGCGCACTGACAAGCATCCCGTCATGGCTGAT CTGCGTGAATCTGGTGCGATTGAGCAGGATGCAGACATGATCGTTTTTATCTACCGGGATGAGTATTACAACAAAGATTC TCCGGATAAGGGTTTGGCGGAAATCATCATCGGTAAGCATCGCAGCGGCCCGACAGGTTCGTGCAAGTTGAAGTTCTTTG GCGAGTACACCCGTTTCGATAATCTGGCCCACGACTCAATTGGCACATTTGAGTAG Protein sequence : MSARPGFHSNYQREPGDREALRVDPLRVPPHSVEAEQAVLGGLMLAPDALDKINDRLTENDFYRRDHRMIYRAICDLSRK MRPFDVVTLGEWFESQGMLEVVDHGAYLIELASTTPSAANIVAYAEIVRDKAVLRQLIEVGTKIVNDGFQPEGRESIDLL AEAEKSVFGIAETGARGRIDFVAMPGALKDAFEQLRDRFENGSNVTGLPTGYNDFDAMSAGLQPTDLIVLAARPAMGKTT FALNIAEYVAIKSKKTVAVFSMEMSAAQLAMRLISSNGRINAQRLRTGQLEDEDWARVTGAIKMLKETKIFIDDTPGVSP EVLRSKCRRLKREHDLGLVVVDYLQLMSVPGNSENRATEISEISRSLKGLAKELNVPVIALSQLNRSLETRTDKHPVMAD LRESGAIEQDADMIVFIYRDEYYNKDSPDKGLAEIIIGKHRSGPTGSCKLKFFGEYTRFDNLAHDSIGTFE |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 2e-94 | 49 |
api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 8e-86 | 46 |
dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 2e-85 | 46 |
STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-76 | 46 |
t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-76 | 46 |
dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 3e-81 | 45 |
dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 3e-85 | 45 |
PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 2e-79 | 45 |