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Name : XF0354 (XF0354) Accession : NP_297644.1 Strain : Xylella fastidiosa 9a5c Genome accession: NC_002488 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 360636 - 362792 bp Length : 2157 bp Strand : + Note : catalyzes branch migration in Holliday junction intermediates DNA sequence : ATGCCGCGTGCACGTTCGCATGCCCCCGACTTGAACGTCGCTGGCAATGCCCCATTGTCGGTGCTGCCGCGAGTTGGGCC GGTATTAGCTGGAAAATTCGCTGCGCGTGGCATCTTCACCTTGCAGGATTTGTGGCTACTGCTCCCATTACGTTATGAGG ACCGTACCCGGCTAACCCCGATTGCCGAGCTTCAGGATGGGGTTGCGGTTCAGATCGAGGCCCGAGTGGAAGCGGTGGAG CGTAGTTTCCGTTACCGGCCGCTATTACGCGTGGTGTTGACCGACGACGCACATCACATACTGACGATGCGTTTTTTCCA TTTTCGCGCCGCGCAGATTGCGCGGTTTACTGTCGGCACAAGGGTGCGTGCGTATGGCGTGCCCAAACTTGGCCAATATG GTTGGGAGATTGTCCATCCCAGCTACCGCATCCTTGCCCCTGGGGAAGATGTCCGGCTCAATGACTGCTTGGACCCGGTG TATCCGGTGATTGAGGGTGTCGGGCCTGCCATCGTGCGTCAGCTCATCCGCGAAGCGTTGGAACATTTACCTACGGATGC AGTCTTAGAACTCTTGCCAGACGTTTGGTTGAGTGACCTTGGCCTGCCAATGCTGCGTACTGCCCTACTGATCATGCACC GGCCCCCGCTGAATACGGATATTGCCCGATTGATGGTGGGCACTCACCCCGCGCAGCAGCGCTTGTCGTTGGAAGAATTG CTTGCCCACCAACTTAGCTTGCGTCGTCAGCGTATTGCATTGCAACGTCATTCCGCTCCCGCATTGCCTGATGGAGCGGC TTTGGTGGCCTCTTTGTTGCACGCACTGCCGTTTCACCTCACTGCTGCGCAGCAACAGGTATTCGCCCAGATTGCTGCTG ATGTGGCCAAGCCGGTCCCAATGCTGCGTCTTGTGCAGGGTGATGTTGGCAGCGGTAAGACCGTAGTTGCAGCATTGGCC GCATTGCTTGCTGTGGAGCAAAACAAGCAGGTGGCTCTGGCGGCACCGACAGCGTTACTGGCCGAGCAACACTTTATCAA CCTGCGTGACTGGCTGGAGCCATTGGGCGTGCGTGTGCATTGGTTGGCTGCCAAGGTGACCGGCAAGGCCCGTCTCCAAG CGCTGAATGATGTGGCCTCTGGTGATGCGCAGGTGGTGGTCGGTACACATGCCCTGATGCAGGAGTCTGTGGTGTTTCAT GACTTGGCACTGACCATTGTCGATGAACAGCACCGTTTTGGTGTCCATCAGCGCTTGTTGCTTCGTGACAAAGGGGCCAC TGCTGGCATCGTGCCGCATCAGTTAGTGATGACCGCCACACCGATTCCACGCACCCTAGCGATGGCTGCGTATGCTGATT TGGATGTTTCGGTGATTGACGAAATGCCACCTGGCCGTACCCCGGTGCAAACGAATGTATTGAGTGCTGAGCGTCGCCCG GAACTGGTGGAACGTATCCGCCTGGCTTGCGCTCAGGGGCGCCAGGTTTATTGGGTGTGTACGCTGATCGACGAAAGCCA AACGGAAGCAGAACAGGCACCCCCCAGCAGTAACGATATTGAGCATCGCAGCGAGGTACAGGCGGCACAGGCCACCTATG AAGCACTGTCTGCACAATTGCCTGGTGTCCGTGTCGGACTCGTGCATGGGCGCATGAAGGCAGCGGAAAAACAGCGGACA ATGCGTGCATTCAAATGCAACGAAATTGATGTCTTGGTTGCTACCACGGTGATTGAAGTGGGTGTCGATGTCCCTAATGC GTCGCTCATGATTATCGAAAATGCTGAGCGTTTTGGTTTAGCGCAACTCCATCAGTTACGTGGTCGGGTCGGACGTGGTT CTGTTGTGTCAAGTTGCGTTCTGTTGTATCAGCCCCCGCTGTCGATGCTGGCGCGTCAGCGTTTGGAGATCATGCGCCAG ACCAATGATGGTTTTGCGATTGCTGAAAAAGATCTGGAATTACGTGGTCCCGGCGAATTGTTGGGGACACGTCAAACAGG TCTTGCCGCGTTTCGTGTTGCTGACCTTGCCCGCGATGCCCATCTGCTGCCTCGCGTGTATTCGTTGGCGAACATGTTGC TTGACGAATCGCCACAGTTAGCTGATCAAGTGATTGCGCGCTGGATTGGTAGTGCGGTGCGTTATGCATCCGCCTGA Protein sequence : MPRARSHAPDLNVAGNAPLSVLPRVGPVLAGKFAARGIFTLQDLWLLLPLRYEDRTRLTPIAELQDGVAVQIEARVEAVE RSFRYRPLLRVVLTDDAHHILTMRFFHFRAAQIARFTVGTRVRAYGVPKLGQYGWEIVHPSYRILAPGEDVRLNDCLDPV YPVIEGVGPAIVRQLIREALEHLPTDAVLELLPDVWLSDLGLPMLRTALLIMHRPPLNTDIARLMVGTHPAQQRLSLEEL LAHQLSLRRQRIALQRHSAPALPDGAALVASLLHALPFHLTAAQQQVFAQIAADVAKPVPMLRLVQGDVGSGKTVVAALA ALLAVEQNKQVALAAPTALLAEQHFINLRDWLEPLGVRVHWLAAKVTGKARLQALNDVASGDAQVVVGTHALMQESVVFH DLALTIVDEQHRFGVHQRLLLRDKGATAGIVPHQLVMTATPIPRTLAMAAYADLDVSVIDEMPPGRTPVQTNVLSAERRP ELVERIRLACAQGRQVYWVCTLIDESQTEAEQAPPSSNDIEHRSEVQAAQATYEALSAQLPGVRVGLVHGRMKAAEKQRT MRAFKCNEIDVLVATTVIEVGVDVPNASLMIIENAERFGLAQLHQLRGRVGRGSVVSSCVLLYQPPLSMLARQRLEIMRQ TNDGFAIAEKDLELRGPGELLGTRQTGLAAFRVADLARDAHLLPRVYSLANMLLDESPQLADQVIARWIGSAVRYASA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 6e-97 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| XF0354 | NP_297644.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 1e-151 | 54 |
