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Name : XF2742 (XF2742) Accession : NP_300019.1 Strain : Xylella fastidiosa 9a5c Genome accession: NC_002488 Putative virulence/resistance : Unknown Product : type I restriction-modification system DNA methylase Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : - Position : 2635782 - 2637341 bp Length : 1560 bp Strand : - Note : similar to GI|2624278 (percent identity: 53 %/query alignment coverage: 100.6 %/subject alignment coverage: 96.7 %); identified by sequence similarity; ORF located using Glimmer/RBSfinder DNA sequence : ATGGCCCATCGCAAGACAACAACGAAAAACGGCAACGGCGGCACCCTCGGCTTTGAGGCTGAACTCTTCAAAGCCGCCGA CAAACTGCGCGGCAATATGGAGCCTTCCGATTACAAACATGTTGCACTCGGGCTGATCTTCCTGAAGTACATCTCCGATG CCTTCGAGGCCAAGCACAGCGCACTATTAGCAGAAGATGCCCAGGCCGCCGAAGACAAAGACGAGTACCTCGCACATAAC GTGTTCTGGGTGCCCAAGCAGGCCCGCTGGTCACATCTGAAGGCCAACGCCAAACAGTCCACCATCGGCACCTTGATTGA TGAAGCGATGCGCGATATCGAGAAAGACAACCCCTCCCTCAAGCATGTGCTGCCCAAGGACTACGCCCGGCCGGCGCTCA ATAAAGTGATGCTGGGGGAGTTGATCGACTTGATTTCTGGCATCGCGCTCAATGAAGAAGGTGCCCGCTCCAAAGACATT CTGGGGCGGGTGTACGAATATTTCTTGGGCCAATTCGCCGGGGCCGAAGGCAAGCGTGGCGGCGAGTTCTACACCCCGCG TTCTGTGGTGCGCGTTCTTGTCCAGATGCTGGAACCCTACTCGGGCCGTGTCTACGACCCCTGCTGCGGCTCCGGTGGGA TGTTCGTACAGTCGGAAAAGTTCGTCCTGGAGCATGGCGGCCGCATCGGTGACATTGCGATTTATGGCCAAGAGTCGAAC TACACCACGTGGCGCCTGGCCAAGATGAATCTAGCGGTGCGTGGTATCGACTCTGATATCCGTTGGAACAACGAAGGCAG TTTTCACAACGACGCGCTGCGCGACCTCAAAGCGGATTACATTCTCGCCAATCCACCGTTCAATATTTCCGATTGGGGCG GCGACCGCCTCCGCGAGGACGTGCGTTGGAAATTCGGCGTGCCGCCCGCAGGCAACGCTAACTACGCCTGGTTGCAGCAT ATCTACCACCATCTGGCGCCCAATGGCACGGCGGGCGTGGTGCTCGCCAACGGCTCAATGAGCTCCAACCACTCTGGTGA GGGGGAGATCCGCACACACATGATTGAGGCTGACATCGTGGATTGCATGATCGCAATGCCGGGGCAGCTCTTTTACTCCA CCCAGATTCCGGCCTGCCTGTGGTTTCTGGCGCGTAATAAAAATCCCGGCAAAGGGCTGCGCGACCGACGCGGGCAGGTG TTGTTGATGGATGCCCGCGCGCTGGGTGTGCTGGTGGATCGCACCCGGCGTGAACTCACGGATGAGCACATTCAGCAGAT CGCAGACACCTACCACGCCTGGCGTGGAGAACAAGGCGCGGCTGCCTATGCCGACGTGGCAGGCTTTTGCAAATCCGCCA CCTTGGAGGACATCCGCAAGCAGGGTTATGTGTTGACGCCGGGGCGTTATGTCGGCGCGGTGGAACGAGAAGATGACGGC GAGCCCTTCCCGCAAAAGATGCAGCGGCTTTCCGCACAGTGGCGCGCGCAGCGCGCGGCGGCGGCCAAGTTGGACGCGGC GATTGCGGCCAATCTGAAGGAGCTTGGGTATGGTGGGTGA Protein sequence : MAHRKTTTKNGNGGTLGFEAELFKAADKLRGNMEPSDYKHVALGLIFLKYISDAFEAKHSALLAEDAQAAEDKDEYLAHN VFWVPKQARWSHLKANAKQSTIGTLIDEAMRDIEKDNPSLKHVLPKDYARPALNKVMLGELIDLISGIALNEEGARSKDI LGRVYEYFLGQFAGAEGKRGGEFYTPRSVVRVLVQMLEPYSGRVYDPCCGSGGMFVQSEKFVLEHGGRIGDIAIYGQESN YTTWRLAKMNLAVRGIDSDIRWNNEGSFHNDALRDLKADYILANPPFNISDWGGDRLREDVRWKFGVPPAGNANYAWLQH IYHHLAPNGTAGVVLANGSMSSNHSGEGEIRTHMIEADIVDCMIAMPGQLFYSTQIPACLWFLARNKNPGKGLRDRRGQV LLMDARALGVLVDRTRRELTDEHIQQIADTYHAWRGEQGAAAYADVAGFCKSATLEDIRKQGYVLTPGRYVGAVEREDDG EPFPQKMQRLSAQWRAQRAAAAKLDAAIAANLKELGYGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 1e-146 | 61 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 4e-146 | 61 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 3e-146 | 60 |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 3e-114 | 48 |
