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Name : gltD (XF2709) Accession : NP_299986.1 Strain : Xylella fastidiosa 9a5c Genome accession: NC_002488 Putative virulence/resistance : Unknown Product : glutamate synthase subunit beta Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0493 EC number : 1.4.1.13 Position : 2590119 - 2591603 bp Length : 1485 bp Strand : - Note : glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate DNA sequence : ATGAGTCGCAAGCACGCTTTCCAATTTCTCGATTTGCCTCGGCAGATGCCTCAACGCATCCCGGTGGAGCTGCGTACTTC CGGGGATTGGCGGGAGTTATACGGTAAGTTCGATAAGGCCGAAGCGCAGTACCAAGCCGGTCGCTGTTTGGACTGCGGTA ATCCATATTGCAGTTGGAAGTGTCCGGTGCATAACGCCATCCCGCAGTGGTTGCAGTTAGTGCAGGAAAATCGCATTGAT GAGGCCGCAGCGTTGTGCCATGCAACCAACCCGCTTCCTGAAGTGTGCGGTCGGGTGTGTCCGCAGGACCGTCTCTGTGA AGGCAGTTGCACGCTGGAGGAGTTTGGTGCGGTTACCATCGGTGCGGTGGAAAAGTACATTGTGGATACCGCGTTGCAGC AGGGGTGGCGTCCCGATTTGAGCCATGTGCAACCGACGGGTTGGCGTGTGGCGGTGGTCGGTGCAGGGCCTGCCGGCCTT GCATGTGCGGATCGGTTGGCGCGTGCTGGGGTTCAGGCGGTGGTGTATGACCGCTATGAGCAGATCGGTGGGTTGCTGCA GTTCGGGATTCCCAGTTTTAAGCTTGATAAGGCGGTGATGAGTACGCGCCGCAAAGTGCTTGAGGGCATGGGCGTAGAGT TTCGATTGGGTGTGGAGATTGGAAAGGATCTGGGGATTGAAGCGTTGCTGGAGCACTACGATGCAGTGTTCCTTGGCGTC GGTGCGTATCGCTACACGGACGGTGGCTTGCCGGGTCAGGACTTGAAAAACGTGTTGCCGGCATTACCGTTTTTGGTTCA GAACGGACGTATCGTTTCTGGCAATGATCCGTATGGCCGTCCGATTGCCGGTTGGGAGGATCAGGTGCAGTTGCCGGATG TGACGGGGAAGTCTGTGGTTGTACTCGGTGGCGGTGATACCGGCATGGATTGTGTACGGAGTGCGATCCGTTTAGGTGCA ACTAAAGTCACCTGTATCTATCGGCGTGATGAGGCGAATATGCCTGGTTCGGCGCGCGAGGTTGCTAACGCGCGGGAAGA GGGGGTGCGCTTTCTGTTCAATCGTCAGCCATTGTCGATTCAATCCGGTACCGACAAACAAGCCATTGGTGTCACTGTGG TGGAAACGAAGCTTGCCGAGCCGGATGCCAATGGTCGTCGCAACGCAGTGCCTATCCAGGGCACTGAAGCGGTGCTGGAA GCGGATGTGGTGATTATCGCTTTCGGTTTCTCGCCGATGTTGCCGGAGTGGTTAACTGCGCAGGGTATACAAGCGTCGAG CAACGGTCGCATTGTGGTGGCGTTGTCTGATACTGGCGATGGACTGACCTATCAGACAACGCATCCGAAGTTGTTTGCTG GTGGTGATTGTGTGCGTGGTGCCGATTTAGTTGTCACTGCCGTGGCCGAAGGGCGCGACGCGGCTGAGAGCATTGTGCGG TGGTTGCGTGCGACGGCACAGGTGATGGATGTTGCGGTGATCTGA Protein sequence : MSRKHAFQFLDLPRQMPQRIPVELRTSGDWRELYGKFDKAEAQYQAGRCLDCGNPYCSWKCPVHNAIPQWLQLVQENRID EAAALCHATNPLPEVCGRVCPQDRLCEGSCTLEEFGAVTIGAVEKYIVDTALQQGWRPDLSHVQPTGWRVAVVGAGPAGL ACADRLARAGVQAVVYDRYEQIGGLLQFGIPSFKLDKAVMSTRRKVLEGMGVEFRLGVEIGKDLGIEALLEHYDAVFLGV GAYRYTDGGLPGQDLKNVLPALPFLVQNGRIVSGNDPYGRPIAGWEDQVQLPDVTGKSVVVLGGGDTGMDCVRSAIRLGA TKVTCIYRRDEANMPGSAREVANAREEGVRFLFNRQPLSIQSGTDKQAIGVTVVETKLAEPDANGRRNAVPIQGTEAVLE ADVVIIAFGFSPMLPEWLTAQGIQASSNGRIVVALSDTGDGLTYQTTHPKLFAGGDCVRGADLVVTAVAEGRDAAESIVR WLRATAQVMDVAVI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YP0342 | CAF28571.1 | putative oxidoreductase | Not tested | YAPI | Protein | 8e-118 | 55 |
