|
Name : XF2488 (XF2488) Accession : NP_299766.1 Strain : Xylella fastidiosa 9a5c Genome accession: NC_002488 Putative virulence/resistance : Unknown Product : phage-related baseplate assembly protein Function : - COG functional category : R : General function prediction only COG ID : COG3948 EC number : - Position : 2370117 - 2371010 bp Length : 894 bp Strand : - Note : similar to SP|P51767 (percent identity: 46 %/query alignment coverage: 101.0 %/subject alignment coverage: 99.3 %); identified by sequence similarity; ORF located using Glimmer/RBSfinder DNA sequence : ATGGATAACACCCTGACCGCCATTGATATCTCCAAGCTGCCCATGCCGGATGTTATCCGGCAAGTGGCCGCAGACGTGAT TTTGCAAGAAATGCTGGCTGATCTGGCGGCACGTGATCCGACCCTGAAAGACCTCCTGCCCTCAGACCCCATCTACACCC TGCTGGAAGTGGCCGCCTACCGCGAAGCCGTGCGCCGCTACCAAAGCAACGAAGATGCCAAAGCCGTGATGGTGGCCTTG GCCAGCGATGCCGACCTGGACAATTTAGCCGCATTATTCCGCGTCAAGCGCCTCATGCTGGATGCAGGTGACCCCTCTAA GGGCATTGCCCCGACGATGGAGAGTGATGCCGCCTTCCGGCGGCGTATCGTCCTTGCACCGGAAGGCTACAGCGTCGCCG GTCCAGAAGGCGCTTACATCTACCATGCCATCAGCGCCCATGCCGACGTGCGTGACGTCAGTGCCACCAGTCCAACCCCT GGGGACGTCATCATCACCGTGCTATCACGCAGCGCCAACGGACAGCCTTCACAAGACGTACTTGACGCCGTGATGGCGGC GGTTAACCAAGAATCAGTACGACCGATGACCGATCATGTCACCGTACAACCGGCACAGATCACTGACTACCAAGTCCACG CACGATTGCACACCTACGCCGGACCGGATGCAGCGGTCGTCCTGTCCGAAGCACAGCGCCGCATCACTGCCTACACCACA GACGCATTCCGCTTAGGCCGTGATATTGCCATCAGTGGCCTGTATGCCGGACTGCATGTTGAAGGCATTCAACGCGTAGA ACTGCTCACACCACAACAGGGACTGACGATGGACCGTACCCAGGCGGCCCGCTGCACCAACATCACCGTCGTGCATGGGG GTGTGGATGAATGA Protein sequence : MDNTLTAIDISKLPMPDVIRQVAADVILQEMLADLAARDPTLKDLLPSDPIYTLLEVAAYREAVRRYQSNEDAKAVMVAL ASDADLDNLAALFRVKRLMLDAGDPSKGIAPTMESDAAFRRRIVLAPEGYSVAGPEGAYIYHAISAHADVRDVSATSPTP GDVIITVLSRSANGQPSQDVLDAVMAAVNQESVRPMTDHVTVQPAQITDYQVHARLHTYAGPDAAVVLSEAQRRITAYTT DAFRLGRDIAISGLYAGLHVEGIQRVELLTPQQGLTMDRTQAARCTNITVVHGGVDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4613 | NP_458695.1 | probable phage baseplate assembly protein | Not tested | SPI-7 | Protein | 2e-47 | 44 |
| t4307 | NP_807903.1 | phage baseplate assembly protein | Not tested | SPI-7 | Protein | 2e-47 | 44 |
