Gene Information

Name : XF2286 (XF2286)
Accession : NP_299565.2
Strain : Xylella fastidiosa 9a5c
Genome accession: NC_002488
Putative virulence/resistance : Unknown
Product : seryl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0172
EC number : 6.1.1.11
Position : 2174738 - 2176018 bp
Length : 1281 bp
Strand : -
Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA

DNA sequence :
ATGCTCGATCCGACTCTACTCCGTCAACAGCTTGCGAAACTCGCTGAATGCTTGTCGACTGTACGCGGTTTCACTCTTGA
TGTTGCAGCCCTTGAAGCATTGGAAAGCGAACGTAAACGTATCCAGGTGCATACCCAAGAGTTGCAATCCCTGCGTAACA
GTAAATCTAAGGCGATTGGCCAAGCCAGGAGCAAGGGTGAAGATGTGTCTTCGTTAATGGCTGAGGTTGCCGCTTTTAGT
GATGATTTAAAAGCCTCGGAGATAGCGTTGGAGGAGATCCGTACTGAATTAGAGAAAGTGGCCTTGGGTATTCCCAATTT
GCCACAGCAAGATGTGCCGCTGGGTGCCGATGAACGTGACAACGTAGAGCAGGCCCGTTGGGGAGTGCCACGTACGTTTG
ATTTTTCCATCAAGGATCATGTTGAATTGGGTGCGTGTCATGGTTGGTTAGATGCCGAGAGTGCTGCCAAGCTATCCGGT
GCGCGTTTTACTGTATTGCGTGGCCCCATTGCACGACTGCATCGCGCACTGGCGCAGTGCATGCTTGACTTGCATGTTCG
CCAGCATGGATACGAAGAAGTCAATGTCCCAATCATTGTCAATGCCGACAGCTTGTATGGGACTGGTCAACTACCGAAAT
TTGAAGAGGACATGTTCAGTACTCAGCTCGGTGAGCATCGGCGCTATTTGATTTCGACCTCTGAAATTTCGCTGACTAAT
TTAGTACGTAACGAGATTATTGAGGCGGATCGCCTGCCGTTGCGTATGGCTGCACACTCATTGTGTTTCCGTTCCGAGGC
AGGCAGCGGTGGTCGTGATACGCGTGGCATGATTCGTCAGCATCAGTTTGAGAAGGTCGAATTGGTCAGCGTATGTAAGC
CGCAAGAGAGTGAAGGTGAGCACCAGCGTATGACTCGCTGTGCAGAGACAGTGTTGGAAATGCTGGGACTGCCCTACCGC
AAGATCCTACTGTGTACCGGTGATATGGGATTTGCCGCGACCAAAACCTACGACTTGGAAGTTTGGTTGCCGTCGCAGGG
AATGTATCGCGAGATTTCATCGTGTTCCAACTGCGGTGATTTCCAAGCCAGACGCATGCAGGCCCGTTGGCGCAATTCTG
TCACCGGCAAGCCGGAATTGGTACACACACTCAATGGTTCTGGTGTCGCTGTTGGCCGTGCGATGATTGCGGTGATGGAG
AACTATCAGAATGCTGATGGTTCGATTACGGTGCCGGAGGTGCTGCGTCCTTATATGGATGGTTTGAGTCGGATTGGTTG
A

Protein sequence :
MLDPTLLRQQLAKLAECLSTVRGFTLDVAALEALESERKRIQVHTQELQSLRNSKSKAIGQARSKGEDVSSLMAEVAAFS
DDLKASEIALEEIRTELEKVALGIPNLPQQDVPLGADERDNVEQARWGVPRTFDFSIKDHVELGACHGWLDAESAAKLSG
ARFTVLRGPIARLHRALAQCMLDLHVRQHGYEEVNVPIIVNADSLYGTGQLPKFEEDMFSTQLGEHRRYLISTSEISLTN
LVRNEIIEADRLPLRMAAHSLCFRSEAGSGGRDTRGMIRQHQFEKVELVSVCKPQESEGEHQRMTRCAETVLEMLGLPYR
KILLCTGDMGFAATKTYDLEVWLPSQGMYREISSCSNCGDFQARRMQARWRNSVTGKPELVHTLNGSGVAVGRAMIAVME
NYQNADGSITVPEVLRPYMDGLSRIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
serS YP_003446791.1 seryl-tRNA synthetase Not tested The aminoglycoside resistance gene cluster Protein 9e-95 51