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Name : XF2028 (XF2028) Accession : NP_299310.1 Strain : Xylella fastidiosa 9a5c Genome accession: NC_002488 Putative virulence/resistance : Unknown Product : DNA invertase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1961 EC number : - Position : 1934942 - 1935499 bp Length : 558 bp Strand : - Note : similar to GI|2346994 (percent identity: 81 %/query alignment coverage: 99.5 %/subject alignment coverage: 99.5 %); identified by sequence similarity; ORF located using Glimmer/RBSfinder DNA sequence : ATGCTTATAGGTTATGCCCGTGTCTCAACACAAGACCAAAACCTTGACCTTCAGATCGACGCTTTAACCAAAGCTGGCTG TCAGAAGCTGTTTAACGACAAGATCAGTGGCAGTAACAAAGAGCGGCCAGGACTCACAAAAACGCTGGAAATGCTACGTG AAGGCGATACTCTCGTAGTCTGGAAGCTGGATCGTTTGGGACGTAGCGTTAAAAACCTAGTTGATTTAGTCGGCGATCTG CACAAGCAAGGTGTTCAGTTCAAAAGCCTGACCGACGCTATTGACACCGGCACGCCGTCAGGCCGCTTCTTCTTTCACGT CATGGCCAGTCTCGCCGAAATGGAGCGTGAACTGATGGTAGAACGCACCCGCGCAGGGCTGGAAGTCGCCCGCAAACTTG GCCGTAAGGGTGGTCGCAAACTCAAGATGACCGAGAGTAAAGTCGAATCGGCCAAGAAACTGCTGGCCAGCGGCATGGCT CCCAGGGACGTGGCCAGAAACCTCGGTGTGTCCATTCCTACGCTTTATCGCTGGATTCCGGCAGCCGGTAATCCTTAA Protein sequence : MLIGYARVSTQDQNLDLQIDALTKAGCQKLFNDKISGSNKERPGLTKTLEMLREGDTLVVWKLDRLGRSVKNLVDLVGDL HKQGVQFKSLTDAIDTGTPSGRFFFHVMASLAEMERELMVERTRAGLEVARKLGRKGGRKLKMTESKVESAKKLLASGMA PRDVARNLGVSIPTLYRWIPAAGNP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CDBH8_0918 | YP_005160010.1 | transposase-like protein | Not tested | Not named | Protein | 5e-51 | 62 |
| res | AGK07012.1 | resolvase | Not tested | SGI1 | Protein | 2e-34 | 52 |
| res | AAK02044.1 | resolvase | Not tested | SGI1 | Protein | 2e-34 | 52 |
| res | AGK07070.1 | resolvase | Not tested | SGI1 | Protein | 2e-34 | 52 |
| tnpR | ACD85600.1 | TnpR resolvase | Not tested | SGI2 | Protein | 2e-34 | 52 |
| res | AGF34985.1 | resolvase | Not tested | SGI1 | Protein | 2e-34 | 52 |
| res | AGF35025.1 | resolvase | Not tested | SGI1 | Protein | 2e-34 | 52 |
| res | AGF35059.1 | resolvase | Not tested | SGI1 | Protein | 2e-34 | 52 |
| res | AGK06929.1 | resolvase | Not tested | SGI1 | Protein | 2e-34 | 52 |
| res | AGK06966.1 | resolvase | Not tested | SGI1 | Protein | 2e-34 | 52 |
| 1_318 | CAJ77076.1 | Resolvase | Not tested | AbaR1 | Protein | 1e-28 | 49 |
| ABTW07_3871 | YP_005797119.1 | resolvase IS26 | Not tested | AbaR4e | Protein | 2e-28 | 49 |
| tnpR | ACN81015.1 | TnpR resolvase | Not tested | AbaR5 | Protein | 2e-28 | 49 |
| binR | YP_254224.1 | resolvase/integrase BinR | Not tested | ¥ðSh1 | Protein | 3e-31 | 48 |
| SH1761 | YP_253676.1 | DNA-invertase | Not tested | ¥ÕSh1 | Protein | 1e-31 | 47 |
| binL | YP_254524.1 | DNA-invertase | Not tested | ¥ðSh2 | Protein | 1e-31 | 47 |
