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Name : XF1936 (XF1936) Accession : NP_299218.1 Strain : Xylella fastidiosa 9a5c Genome accession: NC_002488 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 1838683 - 1840683 bp Length : 2001 bp Strand : - Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGACCAAGCCCACACGCCGCCAGTTGGCCAACGCAATCCGTTTCCTTGCCGCTGATGCAGTACAGGCTGCTCATTCTGG GCACCCGGGCATGCCGATGGGCATGGCTGATATCGCTGAAGTTCTTTGGAACGATTTCCTACGCCATAACCCTAACAACC CGAACTGGTTTAACCGCGACCGCTTCGTTCTTTCCAACGGTCACGGCTCGATGTTGCAATATGCATTGCTGCATTTAAGT GGCTATGACCTGCCGTTGGATGAACTCAAGCGATTCCGTCAGCTGCATAGCAAAACAGCTGGTCATCCTGAGCGCAGCGA GACCCCAGGGATTGAGACGACCACGGGGCCACTTGGTCAGGGGTTTGCTAACGCAGTGGGTTTTGCCTTGGCCGAGAAAC TTCTAGCGCAACGCTACAACCGTCCAGAACATCTGATTGTCGATCACCGCACCTGGGTGTTCATGGGTGACGGCTGCCTC ATGGAAGGTATCTCACATGAAGCAGCCGCGCTGGCGGGTACCTGGAACTTAGGCAAATTGATTTGTTTCTGGGATGACAA CAACATTTCTATTGATGGCAATACTGCGGGTTGGTTTACCGAAGACACTCCAGCACGATTCGAAGCCTATGGTTGGCATG TAATCCGCGATATTGATGGCCATGATGCGGAAAAAATCGCAACCGCAATCCAAGCCGCCGTTGCTCAAGAGAACAAGCCC TCATTGCTATGCTGCCGTACCGTGATCGGATTTGGCTCACCCAATAAAGCAGGTAAAGAATCCTCGCATGGTGCCCCATT AGGAGCGGAGGAACTGGAGGCCACGCGTAAGATGTTGGATTGGCCATACGGCCCGTTCGAGATTCCGTCCGAGATTTACG ATGGTTGGCGTGCTAACGGCACAGGCATGCTACGTCAAGCCGAGTGGGAGCAGGGGTTCGACAACTATGCCCGACAGTAT CCTAAGGAAGCAGCTGAATTAACCCGGCGCTCCCACGCTGAGTTACCTACTGATTTTCTCAGCCAATTGGATGCTTACAT TGCCAAAGTTCACGCTGCGGGGCCCTCCATTGCTTCCCGTAAAGCATCGCAGATGGCGATTGAAGCATTTGCACCTTTCC TTCCCGAGTTAATTGGCGGCTCGGCTGACTTGGCACATTCCAATCTAACGTTGTGGAAAGGGAGCCAAACAGTTGTTGGC GATGCCCCCAACGCCAACTATGCCTATTACGGCGTACGTGAGTTTGGGATGAGTGCTATCGCAAATGGACTTGCATTGCA TGGCGGCTTTATCCCCTTCGATGCGACATTTCTAGTCTTCAGTGATTACGCCCGCAACGCAGTGCGTATGAGTGCATTGA TCCCAGCCCATGTGATTCACGTTTACACACATGATTCAATTGGACTTGGCGAAGACGGTCCAACGCATCAGCCTGTTGAA CACTTGGCCGCACTGCGCTACATCCCCAACAATGACGTGTGGCGTCCCTGTGACGCAGTTGAATCTGCAGTGGCATGGAA GGCGGCGATCACTCGCAAGAACGGCCCGAGCTGTTTGGTGTTCAGCCGCCAAAACTTGCCGCACCAACCGCGCCATGATG CACAACTTGAGCAGATTGCACGTGGTGGCTATATCTTGGTCGACGCGGCGAGCAGCATCCCCGACATCATCTTGATCGCG ACCGGCTCGGAAGTCAGCCTAGCGATCGAAGCGAAAAAGACACTTGATGCGATGCAGCTAAAAACACGCGTGGTCTCGAT GCCCTCGACCAATGTGTTTGAACGTCAGGACCCCACCTACCGTGAGTCGGTCCTCCCATCGAAAGTCCACAAGCGTGTTG CAATAGAAGCTGGCGTCACTGGTTTTTGGTGGCAATACGTAGGGTTACATGGTGCCGTGATTGGCCTGGATACCTTTGGT GCATCAGCCCCAGCGGATGTCTTGTACAAACATTTTAATATCACTGCAGAACACGTTGTCGAAGTCGCAAAGGCACTTTA G Protein sequence : MTKPTRRQLANAIRFLAADAVQAAHSGHPGMPMGMADIAEVLWNDFLRHNPNNPNWFNRDRFVLSNGHGSMLQYALLHLS GYDLPLDELKRFRQLHSKTAGHPERSETPGIETTTGPLGQGFANAVGFALAEKLLAQRYNRPEHLIVDHRTWVFMGDGCL MEGISHEAAALAGTWNLGKLICFWDDNNISIDGNTAGWFTEDTPARFEAYGWHVIRDIDGHDAEKIATAIQAAVAQENKP SLLCCRTVIGFGSPNKAGKESSHGAPLGAEELEATRKMLDWPYGPFEIPSEIYDGWRANGTGMLRQAEWEQGFDNYARQY PKEAAELTRRSHAELPTDFLSQLDAYIAKVHAAGPSIASRKASQMAIEAFAPFLPELIGGSADLAHSNLTLWKGSQTVVG DAPNANYAYYGVREFGMSAIANGLALHGGFIPFDATFLVFSDYARNAVRMSALIPAHVIHVYTHDSIGLGEDGPTHQPVE HLAALRYIPNNDVWRPCDAVESAVAWKAAITRKNGPSCLVFSRQNLPHQPRHDAQLEQIARGGYILVDAASSIPDIILIA TGSEVSLAIEAKKTLDAMQLKTRVVSMPSTNVFERQDPTYRESVLPSKVHKRVAIEAGVTGFWWQYVGLHGAVIGLDTFG ASAPADVLYKHFNITAEHVVEVAKAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 63 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 0.0 | 60 |
