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Name : XF1888 (XF1888) Accession : NP_299174.2 Strain : Xylella fastidiosa 9a5c Genome accession: NC_002488 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 1794923 - 1796728 bp Length : 1806 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : GTGAACATCACCACTGCCCTCCCCCTTCCCACCCACTTGCTGTCGGAGAAGGTGACTGCACCTTTACTTGGCGCACGCAA AATTTACATTACCGGATCACGCCAAGATATACGTGTGCCAATGCGCGAGATCGCACTCACACCCAGCTCAGCTCGATACG GCGGAAACGAGAATCTATCACTGGCGCTCTATGACACTTCGGGGATTTACACTGATCCGCAAGCTACGATTGACTTGGCG TGTGGTCTACCTCGATTACGCGCTGCTTGGATTGATGAGCGTGCCGATACCGTAGAAGCTGCGTTGTATTTCAAAGTACC TGAGTCGGTATCTGTCACCGCACCGCCTTTCCCTACAGCGCCACGGCCACGGCGTGCACGTGACAATGTCGCGGTAACGC AACTGGAATATGCACGACGTGGCCTCGTCACTCCAGAAATGGAGTTTGTCGCTATCCGTGAACAACAACGCCGTGAACAA ACTGTCGAAAATCTTCGTGGACAGCGCCATGCAGGTGATGCCTGGGGGGCTTTGGTTGGCACACCCATCACTCCTGAATT CGTACGTGATGAGATCGCACGTGGCCGCGCGATTCTTCCTAATAACATCAACCATCCTGAAAGCGAGCCAATGATTATTG GCCGCAACTTTTTGACAAAAATCAATGCCAATATTGGAACATCAGCCCTGTCTTCCAGCATTGCCGAAGAAGTGGAGAAG CTGGTTTGGGCGATCCGCTGGGGCGCAGACACAATCATGGACCTGTCTACTGGCCGTGACATCCATGCTACTCGAGAATG GATTCTGCGTAATTCACCTGTGCCTGTGGGGACGGTGCCAATTTATCAAGCGTTGGAGAAAGTCGGCGGACATGTTGAAG CTCTGAGTTGGGCCGTGTTTCGTGACACTTTGATCGAACAGGCCGAACAAGGTGTGGACTATGTCACCGTGCATGCAGGA GTCCTCCGAGACTTTATCCCCCTGACTGCTTCACGTTTAACAGGCATCGTCTCGCGTGGTGGCTCCATCATGGCTAGATG GTGTCAGGCACACCGCAGCGAAAACTTCCTATACACGCATTTCGAGGAACTTTGTGAAATCATGCGTGCCTACGACGTGG CATTTTCTCTTGGTGATGGATTGCGCCCAGGCTGCATCGCTGATGCGAACGATGCAGCTCAATTTGCCGAATTGGAGATT CTTGGCGAGTTGACCCATATCGCCTGGAATCACCAAGTACAGGTGATGGTAGAAGGTCCTGGACACGTCCCAATGCATCT AATCAAGGCCAATATGGATAAGCAATTAGCCGCCTGTGGTGAGGCACCTTTCTACACGCTAGGTCCATTAACTACAGATA TCGCCCCAGGTTACGACCACATTACTAGTGCAATTGGCGCGGCAATGATCGGCTGGTATGGGACGGCGATGCTATGTTAC GTGACTCCCAAGGAGCACCTTGGCCTGCCTAATTTGCAAGATGTCCATGATGGCATTATCGCCTACAAAATTGCGGCACA TGCGGCTGATCTTGCCAAAGGGCATCCAGCGGCACAGGCACGTGACGATGCACTCTCTAAAGCACGCTTTGAATTCCGCT GGCAAGATCAATTCCATCTCAGCTTGGATCCAGAAAAAGCACTGGCACTGCATGATGAGAGCCTCCCTAAAGAAGCGCAT AAACGAGCAGCATTCTGTTCGATGTGCGGACCGCAATTCTGTTCAATGAAAATCTCTCAAGAGGTCCGTGACGCTTCCTC TAACGAATTGTCAGATGGAAATACGAATACCAACGACGCTATCTAG Protein sequence : MNITTALPLPTHLLSEKVTAPLLGARKIYITGSRQDIRVPMREIALTPSSARYGGNENLSLALYDTSGIYTDPQATIDLA CGLPRLRAAWIDERADTVEAALYFKVPESVSVTAPPFPTAPRPRRARDNVAVTQLEYARRGLVTPEMEFVAIREQQRREQ TVENLRGQRHAGDAWGALVGTPITPEFVRDEIARGRAILPNNINHPESEPMIIGRNFLTKINANIGTSALSSSIAEEVEK LVWAIRWGADTIMDLSTGRDIHATREWILRNSPVPVGTVPIYQALEKVGGHVEALSWAVFRDTLIEQAEQGVDYVTVHAG VLRDFIPLTASRLTGIVSRGGSIMARWCQAHRSENFLYTHFEELCEIMRAYDVAFSLGDGLRPGCIADANDAAQFAELEI LGELTHIAWNHQVQVMVEGPGHVPMHLIKANMDKQLAACGEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWYGTAMLCY VTPKEHLGLPNLQDVHDGIIAYKIAAHAADLAKGHPAAQARDDALSKARFEFRWQDQFHLSLDPEKALALHDESLPKEAH KRAAFCSMCGPQFCSMKISQEVRDASSNELSDGNTNTNDAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 68 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 68 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 65 |
