|
Name : XF1844 (XF1844) Accession : NP_299130.1 Strain : Xylella fastidiosa 9a5c Genome accession: NC_002488 Putative virulence/resistance : Unknown Product : ammonium transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0004 EC number : - Position : 1759686 - 1761164 bp Length : 1479 bp Strand : + Note : similar to SP|P37905 (percent identity: 57 %/query alignment coverage: 83.5 %/subject alignment coverage: 96.0 %); identified by sequence similarity; ORF located using Glimmer/RBSfinder/Start codon shift: -51 DNA sequence : ATGCACTCTAACTCTTGCCATCTTAGTGATATGAAGAATGGTTTTTTCGCAATGTTGAAGAGCCTGTTTTATACGCTCTG TATATTGATCGCCTTGGCTTTGTTGGCAGGTGGCAATGCGATCGGTCGTGCGGAGGCTCAGGTACAAACCAATCCTTTGC CTAGCGAGCAAGTCACCACCGAATTGTTGATGTCTGAAGCAGCCCCTTCCGACGCGGCTGCAATACCTAAAACGACTCCA ACCCCCGTGGTAGACAAGGGGGATGTTGCTTGGATGCTCACCTCAACGCTATTAGTGCTACTGATGGTGTTACCAGGCTT GGCATTGTTTTACGGCGGTATGTTGCGCTCTAAAAACGTACTATCGATCATGGTACAAATTGGTGTGGTGTTTTCTCTGA TAGCCATCTTGTGGGTGCTCTACGGCTATAGCCTTGCTTTTGCTGATGGTGACATGTTTATCGGTACATTCAATAAGGCA TTTCTTTATGGCGTAGACACTGCAACGTTGGCCGATACCTTCTCTAAAGGGTTCAAACTGCCGGAGTACCTGTACGTTGC TTTCCAGTTGACTTTTGCTGGTATCACCGGGGTATTGATTGTCGGTGCTTTTGCAGAACGCGTGAAATTTGCTGCGGTAC TGCTGTTTATTTTCATCTGGTTTTCCTTCGGCTACCTGCCACTGGCACACATGGTGTGGTCGACGCCAGGTTTTCTGTTG AGCAAGGGGGCCTTGGATTTTGCCGGTGGTACTGTTGTACATATCAATGCTGGTATTGCTGGATTGGTCGGTGCTTACTT TGTTGGTAAGCGTTTTGGTTTTGGCCAGGTTGCCGTTAAGCCGCATAACGTCCCCATGACTTTCACTGGTGCTGCACTGC TATGGGTCGGTTGGTTCGGCTTCAATGCTGGTTCGGCGTTAGAAGCCAATAGCATTGCTGCCTTGGCTTTCATCAACACC ATGCTTGCGACTGCTGCTGCGATCCTCGTTTGGTCGTTGCTCGAAAAGATGACCAAGGGAAAATTCTCAGCCCTGGGTGT TGCTTCAGGCATGATTGCTGGTTTAGTAGGCATCACTCCAGCGGCGGGTACGGTTGGTCCGTTTGGTGCAATTGCGATTG GTGCTGTTGCCGCCGTGTGCTGTATCTGGGGCATCACTGGACTGAAAAGATTATTGAAGGTGGACGATACCTTGGACGTA TTCGGCGTGCATGGCATTGGTGGCATTGTTGGTGCGATTTTGACTGGGGTTTTTACCGATAAGGCGCTAGGCGGTCAGGG ATATGCTGAGGGGATGACAATGAGCAATCAAGTCATGATTCAAGCCATGGGTGTGGGGATCAGCATTGTGTGGATTGGAA TCGTTTCGCTGGTAGGTTTCTTAATTGTCAAACTGCTGTTTGGCTTGCGTGTGAGCGAAGAAGCTGAACGTGAAGGATTG GACATTACATCGCACGGTGAGTCGGCGTACGAGTCCTGA Protein sequence : MHSNSCHLSDMKNGFFAMLKSLFYTLCILIALALLAGGNAIGRAEAQVQTNPLPSEQVTTELLMSEAAPSDAAAIPKTTP TPVVDKGDVAWMLTSTLLVLLMVLPGLALFYGGMLRSKNVLSIMVQIGVVFSLIAILWVLYGYSLAFADGDMFIGTFNKA FLYGVDTATLADTFSKGFKLPEYLYVAFQLTFAGITGVLIVGAFAERVKFAAVLLFIFIWFSFGYLPLAHMVWSTPGFLL SKGALDFAGGTVVHINAGIAGLVGAYFVGKRFGFGQVAVKPHNVPMTFTGAALLWVGWFGFNAGSALEANSIAALAFINT MLATAAAILVWSLLEKMTKGKFSALGVASGMIAGLVGITPAAGTVGPFGAIAIGAVAAVCCIWGITGLKRLLKVDDTLDV FGVHGIGGIVGAILTGVFTDKALGGQGYAEGMTMSNQVMIQAMGVGISIVWIGIVSLVGFLIVKLLFGLRVSEEAEREGL DITSHGESAYES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00287 | YP_008207752.1 | Ammonia permease | Not tested | AbaR25 | Protein | 2e-63 | 51 |
| BJAB0868_00291 | YP_008211617.1 | Ammonia permease | Not tested | AbaR26 | Protein | 2e-63 | 51 |
