Gene Information

Name : XF1786 (XF1786)
Accession : NP_299074.1
Strain : Xylella fastidiosa 9a5c
Genome accession: NC_002488
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 1703470 - 1703691 bp
Length : 222 bp
Strand : -
Note : similar to GI|4106643 (percent identity: 42 %/query alignment coverage: 78.1 %/subject alignment coverage: 93.4 %); identified by sequence similarity; ORF located using Glimmer/RBSfinder

DNA sequence :
GTGACCGCCATGTCGCAAACACCTGTACTGCCACCCAACGAGCGCCGCATTCTGCGTCTGGAAGAAGTCGAAGCGAAGTC
CGGCTTTAAGCGCGCCCACATCTACAACCTGATGAAGAAGCGCCAGTTCCCGCAGGCGCTGCGCCTGGGTGTGCGCGCCG
TCGGCTGGGATTCCATCGAAATCGATCAGTGGATCGCCGAGCGCGTCAACAACCGGGCCTGA

Protein sequence :
MTAMSQTPVLPPNERRILRLEEVEAKSGFKRAHIYNLMKKRQFPQALRLGVRAVGWDSIEIDQWIAERVNNRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C109 AAN62202.1 phage-related protein Not tested PAGI-2(C) Protein 5e-29 95
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 3e-19 67
unnamed CAA21398.1 - Not tested HPI Protein 2e-09 43
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 1e-09 43
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 4e-08 41