Gene Information

Name : XF1785 (XF1785)
Accession : NP_299073.1
Strain : Xylella fastidiosa 9a5c
Genome accession: NC_002488
Putative virulence/resistance : Unknown
Product : chromosome partitioning-like protein
Function : -
COG functional category : D : Cell cycle control, cell division, chromosome partitioning
COG ID : COG1192
EC number : -
Position : 1702552 - 1703427 bp
Length : 876 bp
Strand : -
Note : similar to SP|P37522 (percent identity: 27 %/query alignment coverage: 91.1 %/subject alignment coverage: 104.7 %); identified by sequence similarity; ORF located using Glimmer/RBSfinder

DNA sequence :
ATGCAGGTTGTATCCATCATTTCAACGAAAGGTGGCGTCGGCAAGACCACCACGGCCGCGAACCTGGGCGGGCTCGTCGC
CGACGCGGGGCTGCGCGTGCTGCTGCTCGATCTCGACGTGCAGCCCACCTTGTCGTCCTACTACGAACTGGAACACCGTG
CGCCTGGTGGCATCTATGAGCTGCTGGCCTTCAACGAGCGCGACCTCGGCCAGCTCGTGTCCCGCACAATCATTTCGGGC
CTGGACCTGGTGCTGTCCAACGACCACCGGGGCGAGTTGAACACCTTGCTGCTGCACGCGCCGGATGGGCGCCTGCGGCT
ACGGCACCTGCTGCCGGTCCTGGCTCCCCTCTATGACCTGGTGCTGATCGACACCCAGGGCGCGCGCTCGGTGCTGCTGG
AGATGGCGGTGCTCGCCTCCGACGTTGCGCTGTCGCCCGTGACCCCGGAAATCCTCGCGGCGCGCGAGCTGCGGCGCGGC
ACCATGCAGTTGCTCGAAGACATCGCACCGTACCGGCACCTCGGCATCGAGCCGCCACCGCTGCACCTGCTCATCAACCG
CGTCCACCCCGTGTCGGCGAACGCCCGACTGATCCAGCAGGCCTTGCGCGACCTGTTCCAGGACCATGCCGGCATCCGCG
TGCTGACCACCGACGTGCCGGCCATCGAAGCCTATCCGCGCGCCGCGACGCGCGGCCTGCCAGTGCATCGTGTCGAATAC
CGCCAGCCATCGGGCAGAGTCGCCCCCGCCGCGCTCGACACCATGCGCGGCCTCGCCGGCGAGCTGTTCCCGCAGTGGCA
ACACCGATTTGTCGCGGTGTCCGGCCGTTCGCCAGTCCCTCTTGATACCGGGAGGCCCCATGGCGAACGCACATGA

Protein sequence :
MQVVSIISTKGGVGKTTTAANLGGLVADAGLRVLLLDLDVQPTLSSYYELEHRAPGGIYELLAFNERDLGQLVSRTIISG
LDLVLSNDHRGELNTLLLHAPDGRLRLRHLLPVLAPLYDLVLIDTQGARSVLLEMAVLASDVALSPVTPEILAARELRRG
TMQLLEDIAPYRHLGIEPPPLHLLINRVHPVSANARLIQQALRDLFQDHAGIRVLTTDVPAIEAYPRAATRGLPVHRVEY
RQPSGRVAPAALDTMRGLAGELFPQWQHRFVAVSGRSPVPLDTGRPHGERT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
soj AAN62201.1 putative chromosome partitioning related protein Not tested PAGI-2(C) Protein 1e-112 93
soj AAN62324.1 putative chromosome partitioning related protein Not tested PAGI-3(SG) Protein 6e-85 71
unnamed ABR13462.1 Soj Not tested PAGI-5 Protein 9e-63 54
soj AAP84239.1 chromosome partitioning protein Not tested PAPI-1 Protein 5e-63 54
soj CAI36042.1 ParA-like chromosome partitioning protein Not tested PPHGI-1 Protein 3e-62 50
PMI2642 YP_002152344.1 chromosome partitioning-like protein Not tested Not named Protein 5e-37 42
Pmu_03610 YP_005176259.1 chromosome partitioning ATPase Not tested ICEPmu1 Protein 1e-41 42
api1 CAF28475.1 putative ATPase Not tested YAPI Protein 1e-39 42
YE3515 YP_001007677.1 hypothetical protein Not tested YAPI Protein 6e-40 42
YpsIP31758_3748 YP_001402702.1 hypothetical protein Not tested YAPI Protein 5e-40 42
STY4521 NP_458616.1 hypothetical protein Not tested SPI-7 Protein 3e-36 41
t4226 NP_807828.1 hypothetical protein Not tested SPI-7 Protein 3e-36 41