|
Name : XF1782 (XF1782) Accession : NP_299070.1 Strain : Xylella fastidiosa 9a5c Genome accession: NC_002488 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 1700095 - 1700655 bp Length : 561 bp Strand : - Note : similar to GI|3818611 (percent identity: 30 %/query alignment coverage: 95.2 %/subject alignment coverage: 91.7 %); identified by sequence similarity; ORF located using Glimmer/RBSfinder DNA sequence : ATGTCCGCACCACACCCACTCAACCAGGCCGTCATCGCCCAGGCCCTCTATGACCTGCGCAATGGGCAACTGCGCCGCTG CAAGCTGATGGGGTTTGGCGAGGAAGAGCTGGACGCCCTCAAGCATCCCGCGCTGATCAGCGTGCTGGCCAACGCCAACG TCTCGTGGTGCTCGGTGACGGTCAACCGCGAAGTGCTCCGGCGTCTGCTCAGGCAGGCGCAGGATGTGGAGAAGGAGATC GCCACGGTCGATCGCATGCTGCGCCTCGGCGCGAGCACCGAAATGGTCAGCCGCTTCTACGGCCTGACCCACCAGGAAGT GGCGCTTCGCCGCGAAATCCTCGGCCTGCCCAAGCGCAAGGGTCGCCATCCCGTGCTGGACGAGAAGCAGGACACGGAGC TGTGGCGGCAATGGAAGGCCGTGACCAGCAGCAGGAACGTCGATCTCGAAGACGAGACCTCCATCCTCGATGCCGCCATG GACTTGGCCGAAGGCATGTCGCTGCCTCTGTCGGTGGTCTGGGCCTCGATCAAGAGCTGGGTCGATCAAGGATTGGGTTG A Protein sequence : MSAPHPLNQAVIAQALYDLRNGQLRRCKLMGFGEEELDALKHPALISVLANANVSWCSVTVNREVLRRLLRQAQDVEKEI ATVDRMLRLGASTEMVSRFYGLTHQEVALRREILGLPKRKGRHPVLDEKQDTELWRQWKAVTSSRNVDLEDETSILDAAM DLAEGMSLPLSVVWASIKSWVDQGLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C106 | AAN62199.1 | conserved hypothetical protein | Not tested | PAGI-2(C) | Protein | 2e-79 | 95 |
| ORF SG101 | AAN62322.1 | conserved hypothetical protein | Not tested | PAGI-3(SG) | Protein | 7e-65 | 70 |
