Gene Information

Name : XF1717 (XF1717)
Accession : NP_299006.1
Strain : Xylella fastidiosa 9a5c
Genome accession: NC_002488
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 1637597 - 1638397 bp
Length : 801 bp
Strand : -
Note : similar to SP|O31727 (percent identity: 40 %/query alignment coverage: 83.5 %/subject alignment coverage: 96.5 %); identified by sequence similarity; ORF located using Glimmer/RBSfinder

DNA sequence : 
GTGAGGGGGAATCAAATGACTGCCTTATCTGTGAAATATGCTGCCGATCTAATACGCGGCTTGCAAACACTGACCGTGGA
AGATATTCGCAGCAATCTAACCAAGGTGTATAGCCGTATCATTGCTGCCTGCCAACGTGTTGACCGCCATCCCAGCAGCG
TGACGCTGTTGCCAGTCAGCAAAACCGTGGATGAAGTGCATATCCGATTATCCTACGAAGCCGGATGCAGGAAGCTGGGG
GAGAACAAAGCGCAGGATGCTTACCACAAGTGGGAAGCGATGAGCGATCTCACTGATCTACACTGGTCGGTCATTGGGCA
CCTGCAAACCAATAAAGCCAAGCTAGTTGCACGATTTGCCTCGGAATTCCAGGCACTCGATAGTTTGCGTGTTGCAGAAG
CATTGGAGCGACGTCTTCAGATAGAGGGACGTAGCCTTGACGTGTTGATTCAAGTCAATACCTCCGGTGAAACAAACAAA
TACGGATTACCTCCCGAAGAAGTTGTCCGTTTCGTACAGGCACTCTCCGCATATCCAGCGCTTCGGGTACGCGGTTTGAT
GACGTTGGCGCTGCTCTCTGGTGACACATCGCGGGTGCGGCAATGCTTTACGCAGCTGCGCATCCTACGAGATCGCATCC
AACAAGCATCACCCCAGGGCCACCACATAACCGAGCTGTCCATGGGCATGTCAGGAGATTTGGAAATAGCTATAGAAGAA
GGGGCGACGGTGGTACGTGTAGGACAGGCAATCTACGGTGCACGTGCCCTACCCAACCTCCACTTTCACCATACTGTTTA
A

Protein sequence : 
MRGNQMTALSVKYAADLIRGLQTLTVEDIRSNLTKVYSRIIAACQRVDRHPSSVTLLPVSKTVDEVHIRLSYEAGCRKLG
ENKAQDAYHKWEAMSDLTDLHWSVIGHLQTNKAKLVARFASEFQALDSLRVAEALERRLQIEGRSLDVLIQVNTSGETNK
YGLPPEEVVRFVQALSAYPALRVRGLMTLALLSGDTSRVRQCFTQLRILRDRIQQASPQGHHITELSMGMSGDLEIAIEE
GATVVRVGQAIYGARALPNLHFHHTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 6e-41 48
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 6e-41 48
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 6e-41 48
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 6e-41 48