Gene Information

Name : hemC (XF1627)
Accession : NP_298916.1
Strain : Xylella fastidiosa 9a5c
Genome accession: NC_002488
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 1566917 - 1567834 bp
Length : 918 bp
Strand : +
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence : 
ATGCCTTTACTTCGTATTGCTACCCGCAAAAGTTTACTTGCTATGTGGCAAAGCGAGTATGTCGCTGCGCGTTTACGTAT
GCTGCGCCCTGATTTAGATGTGGTGTTGGTGCCGATGAGCACTCGTGGCGATGAGATCCTGGACCGCTCCCTGGCTGCAA
TTGGTGGTAAAGGGCTGTTTCTCAAGGAGCTGGAACTGGCGATGTTACGTGGTGATGCTGATTGCGCGGTGCATTCGCTG
AAAGATGTGCCTATGGATTTGGAGCCCCCATTTATGCTTGCGGCGGTTTTGAGTCGCGATGACCCGGCCGATGCGCTGAT
TTCTAATGTCTACCTTTCGCTAGAGTCACTCCCAATTGGGGCGCGTGTGGCGACTTCTTCGCTGCGCCGACAAGCCCAGC
TACGCTTTTATCGGCCTGACCTGCGGTTGTTTGACTTGCGGGGTAACGTTAACACGCGCTTGGCGAAGCTTGATAACGGA
GATTACGATGCGATTGTGCTGGCTTGTGCGGGGTTACGTCGGCTGGGATTGGAGCAACGCATGACGGCTCGGCTAGCACC
GCCAGAATGGTTACCTGCGCCAGGTCAGGGGGCGATTGCGGTGGAGTCACTGACCGAGGATGCTCGGATCGGTACATTGT
TGGCTGGTCTTGACGATCTGCCAACGCGCCAATGCGTGGTGGCTGAGCGTACGATGAATCGTGCTCTTCATGGTAGCTGC
CATGTGCCAGTGGGGGCTTATGCATCCTACGAAGTTGGTGGTATGCGATTACAGGGCTTGGTGGGTTGTGTTGCCGATGG
TCGTCTCGTGCGTGCGGAGCTGTGTTCGGCAAAGGATGAGGGCGATATGCTCGGCAGGGCAGTTGCACAGTGCTTGTTGG
ATGCTGGTGCGGCTGAGTTGCTAGCCGCCACTGCATAG

Protein sequence : 
MPLLRIATRKSLLAMWQSEYVAARLRMLRPDLDVVLVPMSTRGDEILDRSLAAIGGKGLFLKELELAMLRGDADCAVHSL
KDVPMDLEPPFMLAAVLSRDDPADALISNVYLSLESLPIGARVATSSLRRQAQLRFYRPDLRLFDLRGNVNTRLAKLDNG
DYDAIVLACAGLRRLGLEQRMTARLAPPEWLPAPGQGAIAVESLTEDARIGTLLAGLDDLPTRQCVVAERTMNRALHGSC
HVPVGAYASYEVGGMRLQGLVGCVADGRLVRAELCSAKDEGDMLGRAVAQCLLDAGAAELLAATA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 7e-54 52
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 7e-54 52