Gene Information

Name : XF1626 (XF1626)
Accession : NP_298915.1
Strain : Xylella fastidiosa 9a5c
Genome accession: NC_002488
Putative virulence/resistance : Virulence
Product : two-component system, regulatory protein
Function : -
COG functional category : K : Transcription
COG ID : COG3279
EC number : -
Position : 1566142 - 1566900 bp
Length : 759 bp
Strand : +
Note : similar to SP|P26275 (percent identity: 47 %/query alignment coverage: 94.4 %/subject alignment coverage: 96.0 %); identified by sequence similarity; ORF located using Glimmer/RBSfinder

DNA sequence : 
TTGCTGCGTATCTTGATTGCCGATGATGAGCCGCTTGCGCGTGAGCGGCTGCGTGTGTTGCTGCAAGCACAAATGCAACA
TTTAGAGGTGGTGGCTGAGGCTGAAAATGGCGAGCAGGTATTACATGATTGTCAGCGTCTGAATCCTGATTTGGTCCTGA
TGGACATTGCTATGCCTGGCATTGATGGTTTGGAAACAGCACGTTATTTACGTCATTTACCTGCTTGTCCAGCGGTTGTG
TTTTGCACTGCTTATGGTGATCACGCATTGTCGGCATTTGATGTGGAGGCGATTGATTACCTGATGAAGCCAGTGCGTGC
GGAACGGCTTCATGCGGCATTGAAACGAGTGCAAACCTTCGTGGCTGGACGTTTACGTGAACCCCAGACCTCGTGTGATG
AGACACCACGTACTCATTTGTGCGCGCGTATCCGCGGCGGATTGCGATTGATTCCTTTGGATCAGGTGCGTTATCTACAA
GCAGATGAGAAGTACGTTGTGATCTGTCACGAGCAGGGGGAGGATTTGATTGAGGAATCGTTGAAATCGTTGGAAAAGGA
GTTTAGTGACAGGTTTGTACGTATCCATCGCAATTGTTTGATTGCGCGTGCCGAACTGACCGAGTTGCGTCGTTGTAGCG
ATGGACAGGTACAGGCAGTGCTTCGCAATGTTGTTACACCGTTAGGCGTGAGTCGGCGTTGTGTCCCTTTGCTGTGTGAT
CAGTTGCGTCTGTCGGCTGTTTTGACAGGTCGCTGGTAA

Protein sequence : 
MLRILIADDEPLARERLRVLLQAQMQHLEVVAEAENGEQVLHDCQRLNPDLVLMDIAMPGIDGLETARYLRHLPACPAVV
FCTAYGDHALSAFDVEAIDYLMKPVRAERLHAALKRVQTFVAGRLREPQTSCDETPRTHLCARIRGGLRLIPLDQVRYLQ
ADEKYVVICHEQGEDLIEESLKSLEKEFSDRFVRIHRNCLIARAELTELRRCSDGQVQAVLRNVVTPLGVSRRCVPLLCD
QLRLSAVLTGRW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00326 YP_008207791.1 Response regulator of the LytR/AlgR family Not tested AbaR25 Protein 9e-36 43
BJAB0868_00330 YP_008211656.1 Response regulator of the LytR/AlgR family Not tested AbaR26 Protein 9e-36 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XF1626 NP_298915.1 two-component system, regulatory protein VFG0119 Protein 2e-40 48