Name : XF1465 (XF1465) Accession : NP_298754.1 Strain : Xylella fastidiosa 9a5c Genome accession: NC_002488 Putative virulence/resistance : Virulence Product : N-acetylglucosamine-6-phosphate deacetylase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1820 EC number : - Position : 1410853 - 1412013 bp Length : 1161 bp Strand : + Note : similar to SP|P15300 (percent identity: 39 %/query alignment coverage: 96.6 %/subject alignment coverage: 97.6 %); identified by sequence similarity; ORF located using Glimmer/RBSfinder DNA sequence : GTGATGGGTGCTTCTTCTGGGGTCGCCGGATTCATCAATGGCCGTGTCCTGATCGATACCGGGTTCCGTCATGATCTGGC GGTGCTATTGCGCGGTGGATGCATTCAAGCACTGCTGCCGCATGATGATCCGCGGGTGACGGAGGGGGCGCAGTGGATGG ACTTGCGGGGAGGTCTGTTGCTGCCTGGGTTTATCGATATCCAGGTGAATGGTGGCGGTGGTGTGCTGTTCAATAATGCG CGTGATGTGGATGCGTTGGCGACGATCGCGCGTGCGCACCGTCGCTACGGGACGACGGGACTGTTACCGACATTGATTAG TGACACTGTGGAGGTGATGGCTGAGGCCATTGCTGCCACGCGTGCCGCGATTGCTCAGGGGGTACCGGGAATCCTCGGGA TTCACTTGGAAGGCCCTTACCTCAATCCGCTCCGTAAAGGGACCCATGACCACACTCAGTTCCGTGTGCCGCAGTTGCAT GAGGTGATGCGGTGCACGGCATTGGATAACGGGGTGACTCTGGTGACGTTGGCGCCTGAGCAGGTGCCGCTTGAGATGAT CCGTGTTTTTGTCGAGCGTGGTGCGATCGTCTTTGCTGGGCATACTGCAGCGACGTATGAGCAAGTGCGCGCTGGCATCG CAGCGGGTGTCACAGGGTTTACGCATCTGTACAACGCGATGTCGCAGTTAGTCGGGCGCGAGCCGAATGTGGTGGGTGCT GCGCTGGAAGATCCGGATACATGGTGCGGGATCATCGTTGATGGCGTACACGTGCATCCGGCGAGTCTGCGTGTGGCCTT AGCCGCCAAGCCGCGCGGTAAGGTGCTGCTGGTGACCGATGCGATGCCGCCAGTTGGCAGTGACAGTGTTCACTACGATC TCTATGGTGAAACGATTACGGTGATGGATGGTGTGGTCCGTAATGCGGCTGGTGCGTTGGCGGGTGCGGCGCTGGATATG GCAACGGCGGTGCGCAATACGGTGCATTGGTTGGGTGTTGATTTGGCTGAGGCTGTGCGCATGGCCTCGACCTATCCGGC GCAGTGCATCGGGTTAGGGGATCGTCTGGGGAGGATTGCGCCTGGTTATCAAGCCGACCTAGTGTGGATTGACGACGACG TGCAGGTACAGGGCACGTGGATTGCTGGTGTGGGCGATTGA Protein sequence : MMGASSGVAGFINGRVLIDTGFRHDLAVLLRGGCIQALLPHDDPRVTEGAQWMDLRGGLLLPGFIDIQVNGGGGVLFNNA RDVDALATIARAHRRYGTTGLLPTLISDTVEVMAEAIAATRAAIAQGVPGILGIHLEGPYLNPLRKGTHDHTQFRVPQLH EVMRCTALDNGVTLVTLAPEQVPLEMIRVFVERGAIVFAGHTAATYEQVRAGIAAGVTGFTHLYNAMSQLVGREPNVVGA ALEDPDTWCGIIVDGVHVHPASLRVALAAKPRGKVLLVTDAMPPVGSDSVHYDLYGETITVMDGVVRNAAGALAGAALDM ATAVRNTVHWLGVDLAEAVRMASTYPAQCIGLGDRLGRIAPGYQADLVWIDDDVQVQGTWIAGVGD |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
VC1783 | NP_231418.1 | N-acetylglucosamine-6-phosphate deacetylase | Not tested | VPI-2 | Protein | 4e-53 | 41 |
nagA-2 | YP_001217323.1 | N-acetylglucosamine-6-phosphate deacetylase | Not tested | VPI-2 | Protein | 4e-53 | 41 |
nagA | ACA01848.1 | N-acetylglucosamine-6-phosphate deacetylase | Not tested | VPI-2 | Protein | 4e-53 | 41 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
XF1465 | NP_298754.1 | N-acetylglucosamine-6-phosphate deacetylase | VFG1116 | Protein | 2e-53 | 41 |