Gene Information

Name : XF1465 (XF1465)
Accession : NP_298754.1
Strain : Xylella fastidiosa 9a5c
Genome accession: NC_002488
Putative virulence/resistance : Virulence
Product : N-acetylglucosamine-6-phosphate deacetylase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1820
EC number : -
Position : 1410853 - 1412013 bp
Length : 1161 bp
Strand : +
Note : similar to SP|P15300 (percent identity: 39 %/query alignment coverage: 96.6 %/subject alignment coverage: 97.6 %); identified by sequence similarity; ORF located using Glimmer/RBSfinder

DNA sequence : 
GTGATGGGTGCTTCTTCTGGGGTCGCCGGATTCATCAATGGCCGTGTCCTGATCGATACCGGGTTCCGTCATGATCTGGC
GGTGCTATTGCGCGGTGGATGCATTCAAGCACTGCTGCCGCATGATGATCCGCGGGTGACGGAGGGGGCGCAGTGGATGG
ACTTGCGGGGAGGTCTGTTGCTGCCTGGGTTTATCGATATCCAGGTGAATGGTGGCGGTGGTGTGCTGTTCAATAATGCG
CGTGATGTGGATGCGTTGGCGACGATCGCGCGTGCGCACCGTCGCTACGGGACGACGGGACTGTTACCGACATTGATTAG
TGACACTGTGGAGGTGATGGCTGAGGCCATTGCTGCCACGCGTGCCGCGATTGCTCAGGGGGTACCGGGAATCCTCGGGA
TTCACTTGGAAGGCCCTTACCTCAATCCGCTCCGTAAAGGGACCCATGACCACACTCAGTTCCGTGTGCCGCAGTTGCAT
GAGGTGATGCGGTGCACGGCATTGGATAACGGGGTGACTCTGGTGACGTTGGCGCCTGAGCAGGTGCCGCTTGAGATGAT
CCGTGTTTTTGTCGAGCGTGGTGCGATCGTCTTTGCTGGGCATACTGCAGCGACGTATGAGCAAGTGCGCGCTGGCATCG
CAGCGGGTGTCACAGGGTTTACGCATCTGTACAACGCGATGTCGCAGTTAGTCGGGCGCGAGCCGAATGTGGTGGGTGCT
GCGCTGGAAGATCCGGATACATGGTGCGGGATCATCGTTGATGGCGTACACGTGCATCCGGCGAGTCTGCGTGTGGCCTT
AGCCGCCAAGCCGCGCGGTAAGGTGCTGCTGGTGACCGATGCGATGCCGCCAGTTGGCAGTGACAGTGTTCACTACGATC
TCTATGGTGAAACGATTACGGTGATGGATGGTGTGGTCCGTAATGCGGCTGGTGCGTTGGCGGGTGCGGCGCTGGATATG
GCAACGGCGGTGCGCAATACGGTGCATTGGTTGGGTGTTGATTTGGCTGAGGCTGTGCGCATGGCCTCGACCTATCCGGC
GCAGTGCATCGGGTTAGGGGATCGTCTGGGGAGGATTGCGCCTGGTTATCAAGCCGACCTAGTGTGGATTGACGACGACG
TGCAGGTACAGGGCACGTGGATTGCTGGTGTGGGCGATTGA

Protein sequence : 
MMGASSGVAGFINGRVLIDTGFRHDLAVLLRGGCIQALLPHDDPRVTEGAQWMDLRGGLLLPGFIDIQVNGGGGVLFNNA
RDVDALATIARAHRRYGTTGLLPTLISDTVEVMAEAIAATRAAIAQGVPGILGIHLEGPYLNPLRKGTHDHTQFRVPQLH
EVMRCTALDNGVTLVTLAPEQVPLEMIRVFVERGAIVFAGHTAATYEQVRAGIAAGVTGFTHLYNAMSQLVGREPNVVGA
ALEDPDTWCGIIVDGVHVHPASLRVALAAKPRGKVLLVTDAMPPVGSDSVHYDLYGETITVMDGVVRNAAGALAGAALDM
ATAVRNTVHWLGVDLAEAVRMASTYPAQCIGLGDRLGRIAPGYQADLVWIDDDVQVQGTWIAGVGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1783 NP_231418.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 4e-53 41
nagA-2 YP_001217323.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 4e-53 41
nagA ACA01848.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 4e-53 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
XF1465 NP_298754.1 N-acetylglucosamine-6-phosphate deacetylase VFG1116 Protein 2e-53 41