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Name : XF1413 (XF1413) Accession : NP_298702.1 Strain : Xylella fastidiosa 9a5c Genome accession: NC_002488 Putative virulence/resistance : Virulence Product : polysialic acid capsule expression protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 1362070 - 1363071 bp Length : 1002 bp Strand : - Note : similar to GI|2983910 (percent identity: 45 %/query alignment coverage: 96.7 %/subject alignment coverage: 100.0 %); identified by sequence similarity; ORF located using Glimmer/RBSfinder/Start codon shift: 36 DNA sequence : ATGGCTGTCTCATCACTCCAACACAATCACCTCAGCGATACAGCGCTGATCGCCAGCGCAAGACGGGTGATCGAGATTGA GCGTGAGGCGCTGACATTACTCAACGAACGGATAGGCACACCATTCGTGGCAGCCTGTCGGCTGATTCTGAACTCGCACG GCCGCGTGATCAGCACTGGCATGGGCAAATCCGGACACATTGCACGCAAGATCGCCGCCACCTTCGCTTCAACGGGTACA CCCGCATTCTTCGTGCATCCCGGCGAAGCTGGGCATGGCGACCTTGGAATGATCACGGACAGCGATGTGATCCTGGCGTT GTCCTACTCAGGTGAATCAGACGAAGTACGGATGCTGCTTCCAGTCCTCAAGCGTCAAGGCAATCCAATCATTGCCATGA CCGGCCGCCCCCAATCAACACTGGCACAGGCTGCCGATGTGCATCTGGATGTCAGTGTCACCACCGAAGCCTGCCCACTG GATCTAGCACCCACCTCCAGCACAACCACTTCGCTCGTGATTGGCGACGCGCTCGCAGTCGCACTATTGGATGTACGCGG CTTTACTGCTGAAGATTTTGCCCGCTCACACCCCGCTGGCCACCTCGGCCGACGCCTCCTACTGCACATTACGGACGTGA TGCACAGTGGTAATGACCTGCCAGCAGTACATGAGGAAGCCACACTAAGCGAGGCATTACTCGAGATGACTCGTAAACGT CTGGGCATGACTGCAATCGTTGACAACGAGGGCCGACTCCAGGGAGTGTTCACTGACGGCGACTTGCGCCGTGCTCTGGA CAGCAACATTGATGTAAGAAACGCGCGCATCAACGAAGTCATGACTCGCCATCCCAAAACAATCAATGCCGACCAACTCG CGGCCGAAGCTGCACGATTGATGGAAGCCAATAAAATCAATGGTTTGATTGTGGTCGATCCGCAACAGCGTGCGGTAGGC GCCCTGAACATTCACGACCTGCTGCACGCCAAAATTGTTTAA Protein sequence : MAVSSLQHNHLSDTALIASARRVIEIEREALTLLNERIGTPFVAACRLILNSHGRVISTGMGKSGHIARKIAATFASTGT PAFFVHPGEAGHGDLGMITDSDVILALSYSGESDEVRMLLPVLKRQGNPIIAMTGRPQSTLAQAADVHLDVSVTTEACPL DLAPTSSTTTSLVIGDALAVALLDVRGFTAEDFARSHPAGHLGRRLLLHITDVMHSGNDLPAVHEEATLSEALLEMTRKR LGMTAIVDNEGRLQGVFTDGDLRRALDSNIDVRNARINEVMTRHPKTINADQLAAEAARLMEANKINGLIVVDPQQRAVG ALNIHDLLHAKIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 7e-58 | 44 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 4e-58 | 44 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 1e-57 | 44 |
