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Name : CP0434 (CP0434) Accession : NP_444982.1 Strain : Chlamydophila pneumoniae AR39 Genome accession: NC_002179 Putative virulence/resistance : Virulence Product : type III secretion inner membrane protein SctV Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4789 EC number : - Position : 471820 - 473952 bp Length : 2133 bp Strand : - Note : similar to GB:M77014 SP:P31487 PID:386718; identified by sequence similarity DNA sequence : ATGAATAAGCTACTCAATTTCGTCAGCAGAACACTTGGTGGCGATACCGCCTTAAACATGATCAATAAGTCCAGCGACTT AATCCTTGCTCTTTGGATGATGGGCGTTGTCTTAATGATCATTATTCCTTTGCCTCCGCCTATCGTTGACTTGATGATCA CCATCAACTTATCGATCTCTGTATTCTTATTGATGGTGGCTCTTTATATTCCAAGTGCTTTGCAGCTGTCTGTTTTTCCC TCGTTGCTCCTCATCACTACGATGTTCCGCTTGGGGATTAATATTTCCTCTTCTCGACAGATTCTCCTTAAAGCGTATGC GGGTCATGTCATTCAGGCCTTCGGAGACTTCGTGGTTGGAGGGAACTATGTGGTCGGGTTCATTATCTTCCTCATTATTA CAATCATTCAGTTTATCGTAGTAACTAAGGGTGCCGAGCGTGTTGCCGAAGTTGCTGCCCGATTCCGATTGGATGCGATG CCAGGTAAACAGATGGCGATTGATGCGGACTTACGAGCTGGTATGATTGATGCCACACAAGCTCGTGATAAAAGGGCTCA AATCCAAAAGGAAAGTGAACTCTACGGAGCCATGGACGGTGCCATGAAGTTCATCAAAGGAGACGTTATCGCTGGTATCG TTATCTCTTTGATTAACATTGTTGGCGGTTTGACGATTGGGGTGGCTATGCACGGCATGGACCTCGCTCAAGCAGCTCAC GTCTACACTCTTCTCTCCATTGGAGATGGTTTAGTCTCTCAAATTCCTTCTCTTTTGATTGCGTTGACAGCGGGTATTGT CACGACTCGTGTATCGAGTGACAAAAATACGAACTTGGGTAAAGAGATTTCTACTCAGCTCGTTAAAGAACCACGAGCAC TACTCCTTGCAGGTGCTGCAACTTTAGGGGTTGGTTTCTTCAAGGGCTTCCCTCTATGGTCCTTCTCCATTTTAGCATTA ATTTTCGTTGCCTTAGGGATTCTCCTACTGACTAAGAAATCAGCGGCAGGAAAAAAAGGTGGTGGCTCAGGAGCTTCAAC AACCGTAGGGGCTGCTGGTGATGGCGCTGCTACTGTTGGGGATAATCCCGATGACTATTCTCTAACTCTTCCCGTAATTC TAGAACTTGGAAAAGATCTCTCTAAGCTTATCCAACACAAGACAAAATCAGGACAAAGCTTTGTTGATGATATGATTCCT AAAATGCGGCAAGCTCTCTATCAGGATATCGGAATCCGATACCCTGGCATTCATGTTCGCACAGATTCCCCTTCTTTAGA AGGATACGATTATATGATTCTGCTTAATGAAGTCCCTTATGTGCGAGGAAAAATTCCTCCGCACCATGTGTTAACCAATG AGGTGGAGGACAATCTCAGCCGTTATAATCTACCTTTCATTACCTATAAGAATGCTGCGGGTCTTCCTTCAGCTTGGGTT AGTGAAGATGCAAAAGCTATTCTAGAGAAGGCAGCAATTAAATATTGGACGCCGCTCGAAGTGATCATTCTCCATCTTTC GTACTTTTTCCATAAAAGCTCTCAAGAGTTTTTGGGAATTCAAGAGGTACGTTCTATGATCGAATTTATGGAACGTTCAT TCCCGGACTTAGTGAAGGAAGTCACAAGGCTTATTCCATTGCAAAAGCTTACGGAAATCTTTAAGAGATTGGTTCAAGAG CAAATCTCAATTAAAGACCTACGTACAATCTTAGAATCTCTGAGCGAGTGGGCGCAAACTGAGAAAGATACAGTTTTGCT TACAGAATATGTACGGTCTTCTTTAAAGCTTTATATCAGCTTCAAGTTCTCTCAAGGACAATCAGCAATTTCTGTTTATC TCTTAGATCCAGAAATTGAAGAGATGATTCGTGGAGCAATTAAACAGACATCGGCAGGTTCTTACCTTGCTCTAGATCCT GATTCTGTGAACCTAATTTTAAAATCTATGAGGAATACGATCACGCCAACACCTGCAGGAGGCCAACCACCAGTATTATT GACAGCAATTGATGTAAGAAGATATGTACGAAAATTAATAGAAACAGAATTCCCTGACATTGCTGTGATTTCTTATCAAG AAATCCTACCAGAAATCCGCATCCAGCCTTTAGGAAGAATTCAGATTTTCTAA Protein sequence : MNKLLNFVSRTLGGDTALNMINKSSDLILALWMMGVVLMIIIPLPPPIVDLMITINLSISVFLLMVALYIPSALQLSVFP SLLLITTMFRLGINISSSRQILLKAYAGHVIQAFGDFVVGGNYVVGFIIFLIITIIQFIVVTKGAERVAEVAARFRLDAM PGKQMAIDADLRAGMIDATQARDKRAQIQKESELYGAMDGAMKFIKGDVIAGIVISLINIVGGLTIGVAMHGMDLAQAAH VYTLLSIGDGLVSQIPSLLIALTAGIVTTRVSSDKNTNLGKEISTQLVKEPRALLLAGAATLGVGFFKGFPLWSFSILAL IFVALGILLLTKKSAAGKKGGGSGASTTVGAAGDGAATVGDNPDDYSLTLPVILELGKDLSKLIQHKTKSGQSFVDDMIP KMRQALYQDIGIRYPGIHVRTDSPSLEGYDYMILLNEVPYVRGKIPPHHVLTNEVEDNLSRYNLPFITYKNAAGLPSAWV SEDAKAILEKAAIKYWTPLEVIILHLSYFFHKSSQEFLGIQEVRSMIEFMERSFPDLVKEVTRLIPLQKLTEIFKRLVQE QISIKDLRTILESLSEWAQTEKDTVLLTEYVRSSLKLYISFKFSQGQSAISVYLLDPEIEEMIRGAIKQTSAGSYLALDP DSVNLILKSMRNTITPTPAGGQPPVLLTAIDVRRYVRKLIETEFPDIAVISYQEILPEIRIQPLGRIQIF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 2e-131 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CP0434 | NP_444982.1 | type III secretion inner membrane protein SctV | VFG2126 | Protein | 0.0 | 91 |
| CP0434 | NP_444982.1 | type III secretion inner membrane protein SctV | VFG0064 | Protein | 3e-131 | 47 |
| CP0434 | NP_444982.1 | type III secretion inner membrane protein SctV | VFG0384 | Protein | 2e-129 | 46 |
